User profiles for Syed Faraz Ahmed

Syed Faraz Ahmed

University of Melbourne
Verified email at unimelb.edu.au
Cited by 1855

[HTML][HTML] Preliminary identification of potential vaccine targets for the COVID-19 coronavirus (SARS-CoV-2) based on SARS-CoV immunological studies

SF Ahmed, AA Quadeer, MR McKay - Viruses, 2020 - mdpi.com
The beginning of 2020 has seen the emergence of COVID-19 outbreak caused by a novel
coronavirus, Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). There is an …

[HTML][HTML] SARS-CoV-2 T cell responses elicited by COVID-19 vaccines or infection are expected to remain robust against Omicron

SF Ahmed, AA Quadeer, MR McKay - Viruses, 2022 - mdpi.com
Omicron, the most recent SARS-CoV-2 variant of concern (VOC), harbours multiple mutations
in the spike protein that were not observed in previous VOCs. Initial studies suggest …

[HTML][HTML] Vaccinia-virus-based vaccines are expected to elicit highly cross-reactive immunity to the 2022 monkeypox virus

SF Ahmed, MS Sohail, AA Quadeer, MR McKay - Viruses, 2022 - mdpi.com
Beginning in May 2022, a novel cluster of monkeypox virus infections was detected in
humans. This virus has spread rapidly to non-endemic countries, sparking global concern. …

[PDF][PDF] Landscape of epitopes targeted by T cells in 852 individuals recovered from COVID-19: Meta-analysis, immunoprevalence, and web platform

AA Quadeer, SF Ahmed, MR McKay - Cell Reports Medicine, 2021 - cell.com
Knowledge of the epitopes of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
targeted by T cells in recovered (convalescent) individuals is important for understanding …

In silico T cell epitope identification for SARS-CoV-2: Progress and perspectives

MS Sohail, SF Ahmed, AA Quadeer… - Advanced drug delivery …, 2021 - Elsevier
… Sohail a 1 , Syed Faraz Ahmed a 1 , Ahmed Abdul Quadeer a 1 , Matthew R. McKay a b …
the genetic similarity between the two viruses (Ahmed et al. [20], Lee et al. [21], Grifoni et al. …

[HTML][HTML] COVIDep: a web-based platform for real-time reporting of vaccine target recommendations for SARS-CoV-2

SF Ahmed, AA Quadeer, MR McKay - Nature Protocols, 2020 - nature.com
To the Editor—The COVID-19 pandemic, caused by the novel coronavirus SARS-CoV-2,
has brought much of the world to a virtual lockdown. As the virus continues to spread rapidly …

The impact of COVID‐19 on pregnancy and therapeutic drug development

…, H Rezai, SF Ahmed, A Ahmed - British Journal of …, 2022 - Wiley Online Library
Emerging data show that pregnant women with COVID‐19 are at significantly higher risk of
severe outcomes compared with non‐pregnant women of similar age. This review discusses …

[HTML][HTML] Cross-Reactivity Assessment of Vaccine-Derived SARS-CoV-2 T Cell Responses against BA. 2.86 and JN. 1

MS Sohail, SF Ahmed, AA Quadeer, MR McKay - Viruses, 2024 - mdpi.com
The SARS-CoV-2 Omicron sub-variants BA.2.86 and JN.1 contain multiple mutations in the
spike protein that were not present in previous variants of concern and Omicron sub-variants. …

SARS-CoV-2 T cell responses are expected to remain robust against Omicron

SF Ahmed, AA Quadeer, MR McKay - BioRxiv, 2021 - biorxiv.org
Omicron, the most recent SARS-CoV-2 variant of concern (VOC), harbours multiple mutations
in the spike protein that were not observed in previous VOCs. Initial studies suggest …

Inferring effects of mutations on SARS-CoV-2 transmission from genomic surveillance data

B Lee, MS Sohail, E Finney, SF Ahmed, AA Quadeer… - MedRxiv, 2022 - medrxiv.org
New and more transmissible variants of SARS-CoV-2 have arisen multiple times over the
course of the pandemic. Rapidly identifying mutations that affect transmission could facilitate …