User profiles for T. L. Street
Teresa StreetUniversity of Oxford Verified email at ndm.ox.ac.uk Cited by 2404 |
Metagenomic sequencing as a pathogen-agnostic clinical diagnostic tool for infectious diseases: a systematic review and meta-analysis of diagnostic test accuracy …
Metagenomic sequencing is frequently claimed to have the potential to revolutionize microbiology
through rapid species identification and antimicrobial resistance (AMR) prediction. We …
through rapid species identification and antimicrobial resistance (AMR) prediction. We …
Molecular diagnosis of orthopedic-device-related infection directly from sonication fluid by metagenomic sequencing
TL Street, ND Sanderson, BL Atkins… - Journal of clinical …, 2017 - Am Soc Microbiol
Culture of multiple periprosthetic tissue samples is the current gold standard for microbiological
diagnosis of prosthetic joint infections (PJI). Additional diagnostic information may be …
diagnosis of prosthetic joint infections (PJI). Additional diagnostic information may be …
[HTML][HTML] Epidemiological data and genome sequencing reveals that nosocomial transmission of SARS-CoV-2 is underestimated and mostly mediated by a small …
Objectives: Despite robust efforts, patients and staff acquire SARS-CoV-2 infection in
hospitals. We investigated whether whole-genome sequencing enhanced the epidemiological …
hospitals. We investigated whether whole-genome sequencing enhanced the epidemiological …
[HTML][HTML] Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices
Background Prosthetic joint infections are clinically difficult to diagnose and treat. Previously,
we demonstrated metagenomic sequencing on an Illumina MiSeq replicates the findings of …
we demonstrated metagenomic sequencing on an Illumina MiSeq replicates the findings of …
An observational cohort study on the incidence of SARS-CoV-2 infection and B. 1.1. 7 variant infection in healthcare workers by antibody and vaccination status
… Considering efficacy against any PCR-positive result >14 days post 1 st dose, there was no
evidence of a difference by vaccine type following the 1 st (heterogeneity p=0.33) or 2 nd (p=…
evidence of a difference by vaccine type following the 1 st (heterogeneity p=0.33) or 2 nd (p=…
Comparison of R9. 4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction
…, H Webster, S Lipworth, TL Street… - Microbial …, 2023 - microbiologyresearch.org
Complete, accurate, cost-effective, and high-throughput reconstruction of bacterial genomes
for large-scale genomic epidemiological studies is currently only possible with hybrid …
for large-scale genomic epidemiological studies is currently only possible with hybrid …
An observational cohort study on the incidence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and B. 1.1. 7 variant infection in …
…, N Sanderson, KK Chau, TL Street… - Clinical Infectious …, 2022 - academic.oup.com
Background Natural and vaccine-induced immunity will play a key role in controlling the
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic. SARS-CoV-2 …
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic. SARS-CoV-2 …
Clinical metagenomic sequencing for species identification and antimicrobial resistance prediction in orthopedic device infection
TL Street, ND Sanderson, C Kolenda… - Journal of clinical …, 2022 - Am Soc Microbiol
Diagnosis of orthopedic device-related infection is challenging, and causative pathogens
may be difficult to culture. Metagenomic sequencing can diagnose infections without culture, …
may be difficult to culture. Metagenomic sequencing can diagnose infections without culture, …
Optimizing DNA extraction methods for nanopore sequencing of Neisseria gonorrhoeae directly from urine samples
TL Street, L Barker, ND Sanderson… - Journal of clinical …, 2020 - Am Soc Microbiol
Empirical gonorrhea treatment at initial diagnosis reduces onward transmission. However,
increasing resistance to multiple antibiotics may necessitate waiting for culture-based …
increasing resistance to multiple antibiotics may necessitate waiting for culture-based …
High precision Neisseria gonorrhoeae variant and antimicrobial resistance calling from metagenomic Nanopore sequencing
…, J Kavanagh, S Hoosdally, D Crook, TL Street… - Genome …, 2020 - genome.cshlp.org
The rise of antimicrobial-resistant Neisseria gonorrhoeae is a significant public health
concern. Against this background, rapid culture-independent diagnostics may allow targeted …
concern. Against this background, rapid culture-independent diagnostics may allow targeted …