User profiles for Thomas Hollt

Thomas Höllt

Assistant Professor - TU Delft / Leiden University Medical Center
Verified email at tudelft.nl
Cited by 6440

Conserved cell types with divergent features in human versus mouse cortex

…, N Johansen, O Penn, Z Yao, J Eggermont, T Höllt… - Nature, 2019 - nature.com
Elucidating the cellular architecture of the human cerebral cortex is central to understanding
our cognitive abilities and susceptibility to disease. Here we used single-nucleus RNA-…

[HTML][HTML] Comparative cellular analysis of motor cortex in human, marmoset and mouse

…, J Chun, A Dobin, J Gillis, R Hertzano, PR Hof, T Höllt… - Nature, 2021 - nature.com
The primary motor cortex (M1) is essential for voluntary fine-motor control and is functionally
conserved across mammals 1 . Here, using high-throughput transcriptomic and epigenomic …

Approximated and user steerable tSNE for progressive visual analytics

…, L Van Der Maaten, T Höllt… - IEEE transactions on …, 2016 - ieeexplore.ieee.org
Progressive Visual Analytics aims at improving the interactivity in existing analytics techniques
by means of visualization as well as interaction with intermediate results. One key method …

[HTML][HTML] Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types

V Van Unen, T Höllt, N Pezzotti, N Li… - Nature …, 2017 - nature.com
Mass cytometry allows high-resolution dissection of the cellular composition of the immune
system. However, the high-dimensionality, large size, and non-linear structure of the data …

Deepeyes: Progressive visual analytics for designing deep neural networks

N Pezzotti, T Höllt, J Van Gemert… - IEEE transactions on …, 2017 - ieeexplore.ieee.org
Deep neural networks are now rivaling human accuracy in several pattern recognition
problems. Compared to traditional classifiers, where features are handcrafted, neural networks …

Hierarchical stochastic neighbor embedding

N Pezzotti, T Höllt, B Lelieveldt… - Computer Graphics …, 2016 - Wiley Online Library
In recent years, dimensionality‐reduction techniques have been developed and are widely
used for hypothesis generation in Exploratory Data Analysis. However, these techniques are …

[HTML][HTML] Iron loading is a prominent feature of activated microglia in Alzheimer's disease patients

…, J Dijkstra, WMC van Roon-Mom, T Höllt… - Acta neuropathologica …, 2021 - Springer
Brain iron accumulation has been found to accelerate disease progression in amyloid-β(Aβ)
positive Alzheimer patients, though the mechanism is still unknown. Microglia have been …

[PDF][PDF] Mass cytometry of the human mucosal immune system identifies tissue-and disease-associated immune subsets

V Van Unen, N Li, I Molendijk, M Temurhan, T Höllt… - Immunity, 2016 - cell.com
Inflammatory intestinal diseases are characterized by abnormal immune responses and affect
distinct locations of the gastrointestinal tract. Although the role of several immune subsets …

Cytosplore: interactive immune cell phenotyping for large single‐cell datasets

T Höllt, N Pezzotti, V van Unen, F Koning… - Computer Graphics …, 2016 - Wiley Online Library
To understand how the immune system works, one needs to have a clear picture of its cellular
compositon and the cells' corresponding properties and functionality. Mass cytometry is a …

Comparative transcriptomics reveals human-specific cortical features

…, M Tieu, A Torkelson, G Feng, WD Hopkins, T Höllt… - Science, 2023 - science.org
The cognitive abilities of humans are distinctive among primates, but their molecular and
cellular substrates are poorly understood. We used comparative single-nucleus transcriptomics …