User profiles for Thomas J. Y. Kono

Thomas JY Kono

University of Minnesota
Verified email at umn.edu
Cited by 2002

A multipurpose toolkit to enable advanced genome engineering in plants

…, SJ Curtin, J Gil-Humanes, R Čegan, TJY Kono… - The Plant …, 2017 - academic.oup.com
We report a comprehensive toolkit that enables targeted, specific modification of monocot
and dicot genomes using a variety of genome engineering approaches. Our reagents, based …

CRISPR/Cas mutagenesis of soybean and Medicago truncatula using a new web-tool and a modified Cas9 enzyme

JM Michno, X Wang, J Liu, SJ Curtin, TJY Kono… - GM crops & …, 2015 - Taylor & Francis
The CRISPR/Cas9 system is rapidly becoming the reagent of choice for targeted mutagenesis
and gene editing in crop species. There are currently intense research efforts in the crop …

The role of gene flow in rapid and repeated evolution of cave‐related traits in Mexican tetra, Astyanax mexicanus

…, J Weagley, WR Jeffery, AC Keene, TJY Kono… - Molecular …, 2018 - Wiley Online Library
Understanding the molecular basis of repeatedly evolved phenotypes can yield key insights
into the evolutionary process. Quantifying gene flow between populations is especially …

[HTML][HTML] Genome-wide association analysis of stalk biomass and anatomical traits in maize

…, S Heckwolf, K Barry, A Lipzen, CB Ribeiro, TJY Kono… - BMC plant biology, 2019 - Springer
Background Maize stover is an important source of crop residues and a promising sustainable
energy source in the United States. Stalk is the main component of stover, representing …

Development and genetic characterization of an advanced backcross-nested association mapping (AB-NAM) population of wild× cultivated barley

…, GL Brown-Guedira, ED Akhunov, C Liu, TJY Kono… - Genetics, 2016 - academic.oup.com
The ability to access alleles from unadapted germplasm collections is a long-standing problem
for geneticists and breeders. Here we developed, characterized, and demonstrated the …

The role of deleterious substitutions in crop genomes

TJY Kono, F Fu, M Mohammadi… - Molecular biology …, 2016 - academic.oup.com
Populations continually incur new mutations with fitness effects ranging from lethal to adaptive.
While the distribution of fitness effects of new mutations is not directly observable, many …

[HTML][HTML] Genomic variation and DNA repair associated with soybean transgenesis: a comparison to cultivars and mutagenized plants

JE Anderson, JM Michno, TJY Kono, AO Stec… - BMC …, 2016 - Springer
Background The safety of mutagenized and genetically transformed plants remains a subject
of scrutiny. Data gathered and communicated on the phenotypic and molecular variation …

Interruption of continuous opioid exposure exacerbates drug-evoked adaptations in the mesolimbic dopamine system

…, F Baruffaldi, M Pravetoni, L Tian, TJY Kono… - …, 2020 - nature.com
Drug-evoked adaptations in the mesolimbic dopamine system are postulated to drive opioid
abuse and addiction. These adaptations vary in magnitude and direction following different …

Environmental Association Analyses Identify Candidates for Abiotic Stress Tolerance in Glycine soja, the Wild Progenitor of Cultivated Soybeans

JE Anderson, TJY Kono, RM Stupar… - G3: Genes …, 2016 - academic.oup.com
Natural populations across a species range demonstrate population structure owing to neutral
processes such as localized origins of mutations and migration limitations. Selection also …

Comparative genomics approaches accurately predict deleterious variants in plants

TJY Kono, L Lei, CH Shih, PJ Hoffman… - G3: Genes …, 2018 - academic.oup.com
Recent advances in genome resequencing have led to increased interest in prediction of the
functional consequences of genetic variants. Variants at phylogenetically conserved sites …