User profiles for Thomas S. Carroll

thomas carroll

Director Of Bioinformatics, The Rockefeller University
Verified email at rockefeller.edu
Cited by 9064

Enterococcus peptidoglycan remodeling promotes checkpoint inhibitor cancer immunotherapy

ME Griffin, J Espinosa, JL Becker, JD Luo, TS Carroll… - Science, 2021 - science.org
The antitumor efficacy of cancer immunotherapy can correlate with the presence of certain
bacterial species within the gut microbiome. However, many of the molecular mechanisms …

[PDF][PDF] Establishment, maintenance, and recall of inflammatory memory

…, CJ Cowley, SM Sajjath, D Barrows, Y Yang, TS Carroll… - Cell stem cell, 2021 - cell.com
Known for nearly a century but through mechanisms that remain elusive, cells retain a memory
of inflammation that equips them to react quickly and broadly to diverse secondary stimuli…

[HTML][HTML] Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data

TS Carroll, Z Liang, R Salama, R Stark… - Frontiers in …, 2014 - frontiersin.org
With the advent of ChIP-seq multiplexing technologies and the subsequent increase in ChIP-seq
throughput, the development of working standards for the quality assessment of ChIP-…

Oral mucosal breaks trigger anti-citrullinated bacterial and human protein antibody responses in rheumatoid arthritis

…, AD Swafford, TS Carroll, S Kongpachith… - Science translational …, 2023 - science.org
Periodontal disease is more common in individuals with rheumatoid arthritis (RA) who have
detectable anti-citrullinated protein antibodies (ACPAs), implicating oral mucosal …

Cohesin-dependence of neuronal gene expression relates to chromatin loop length

…, MS Oliveira, R Georgieva, YF Wang, TS Carroll… - Elife, 2022 - elifesciences.org
Cohesin and CTCF are major drivers of 3D genome organization, but their role in neurons
is still emerging. Here, we show a prominent role for cohesin in the expression of genes that …

The transcription corepressor LEUNIG interacts with the histone deacetylase HDA19 and mediator components MED14 (SWP) and CDK8 (HEN3) to repress …

D Gonzalez, AJ Bowen, TS Carroll… - Molecular and cellular …, 2007 - Am Soc Microbiol
Transcription corepressors are general regulators controlling the expression of genes involved
in multiple signaling pathways and developmental programs. Repression is mediated …

[HTML][HTML] The pupal moulting fluid has evolved social functions in ants

…, S Heissel, A Sharma, S Valdés-Rodríguez, TS Carroll… - Nature, 2022 - nature.com
Insect societies are tightly integrated, complex biological systems in which group-level
properties arise from the interactions between individuals 1 , 2 , 3 – 4 . However, these …

[PDF][PDF] Sensory discrimination of blood and floral nectar by Aedes aegypti mosquitoes

…, Z Gong, FJH Hol, Z Zhao, TR Sorrells, TS Carroll… - Neuron, 2020 - cell.com
Blood-feeding mosquitoes survive by feeding on nectar for metabolic energy but require a
blood meal to develop eggs. Aedes aegypti females must accurately discriminate blood and …

Impaired cell fate through gain-of-function mutations in a chromatin reader

…, S Chong, F Xuan, A Liang, X Cui, L Gates, TS Carroll… - Nature, 2020 - nature.com
Modifications of histone proteins have essential roles in normal development and human
disease. Recognition of modified histones by ‘reader’ proteins is a key mechanism that …

[PDF][PDF] Creatine-mediated crosstalk between adipocytes and cancer cells regulates obesity-driven breast cancer

…, CB Dykstra, MG Annis, JD Luo, TS Carroll… - Cell metabolism, 2021 - cell.com
Obesity is a major risk factor for adverse outcomes in breast cancer; however, the underlying
molecular mechanisms have not been elucidated. To investigate the role of crosstalk …