The Consortium for Metabonomic Toxicology (COMET): aims, activities and achievements

JC Lindon, HC Keun, TMD Ebbels, JMT Pearce… - 2005 - Future Medicine
The utility of metabonomics in the evaluation of xenobiotic toxicity has been comprehensively
assessed by the Consortium for Metabonomic Toxicology (COMET), formed between five …

The evolution of partial least squares models and related chemometric approaches in metabonomics and metabolic phenotyping

…, RH Barton, CL Boulange, TMD Ebbels… - Journal of …, 2010 - Wiley Online Library
Metabonomics is a key element in systems biology, and with current analytical methods,
generates vast amounts of quantitative or qualitative metabolic data. Understanding of the …

Design and analysis of metabolomics studies in epidemiologic research: a primer on-omic technologies

I Tzoulaki, TMD Ebbels, A Valdes… - American journal of …, 2014 - academic.oup.com
Metabolomics is the field of “-omics” research concerned with the comprehensive characterization
of the small low-molecular-weight metabolites in biological samples. In epidemiology, …

Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts

O Beckonert, HC Keun, TMD Ebbels, J Bundy… - Nature protocols, 2007 - nature.com
Metabolic profiling, metabolomic and metabonomic studies mainly involve the multicomponent
analysis of biological fluids, tissue and cell extracts using NMR spectroscopy and/or mass …

Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA

A Kamburov, R Cavill, TMD Ebbels, R Herwig… - …, 2011 - academic.oup.com
Pathway-level analysis is a powerful approach enabling interpretation of post-genomic data
at a higher level than that of individual biomolecules. Yet, it is currently hard to integrate …

High-resolution magic-angle-spinning NMR spectroscopy for metabolic profiling of intact tissues

…, M Coen, HC Keun, Y Wang, TMD Ebbels… - Nature protocols, 2010 - nature.com
Metabolic profiling, metabolomic and metabonomic studies require robust study protocols
for any large-scale comparisons and evaluations. Detailed methods for solution-state NMR …

Recursive Segment-Wise Peak Alignment of Biological 1H NMR Spectra for Improved Metabolic Biomarker Recovery

KA Veselkov, JC Lindon, TMD Ebbels… - Analytical …, 2009 - ACS Publications
Chemical shift variation in small-molecule 1 H NMR signals of biofluids complicates biomarker
information recovery in metabonomic studies when using multivariate statistical and …

Analytical Reproducibility in 1H NMR-Based Metabonomic Urinalysis

HC Keun, TMD Ebbels, H Antti, ME Bollard… - Chemical research in …, 2002 - ACS Publications
Metabonomic analysis of biofluids and tissues utilizing high-resolution NMR spectroscopy
and chemometric techniques has proven valuable in characterizing the biochemical response …

Correction of mass calibration gaps in liquid chromatography–mass spectrometry metabolomics data

HP Benton, EJ Want, TMD Ebbels - Bioinformatics, 2010 - academic.oup.com
Motivation: High mass accuracy is an important goal in liquid chromatography–mass
spectrometry experiments. Some manufacturers employ a mass calibration system that regularly …

Improved analysis of multivariate data by variable stability scaling: application to NMR-based metabolic profiling

HC Keun, TMD Ebbels, H Antti, ME Bollard… - Analytica chimica …, 2003 - Elsevier
Variable scaling alters the covariance structure of data, affecting the outcome of multivariate
analysis and calibration. Here we present a new method, variable stability (VAST) scaling, …