User profiles for Todd M. Allen

Todd M. Allen

Professor of Medicine, Ragon Institute of MGH, MIT and Harvard
Verified email at partners.org
Cited by 29895

[HTML][HTML] Tat-specific cytotoxic T lymphocytes select for SIV escape variants during resolution of primary viraemia

TM Allen, DH O'Connor, P Jing, JL Dzuris, BR Mothé… - Nature, 2000 - nature.com
Human immunodeficiency virus (HIV) and simian immunodeficiency virus (SIV) infections are
characterized by early peaks of viraemia that decline as strong cellular immune responses …

The epigenetic landscape of T cell exhaustion

…, FD Brown, P Tonnerre, RT Chung, DC Tully, TM Allen… - Science, 2016 - science.org
Exhausted T cells in cancer and chronic viral infection express distinctive patterns of genes,
including sustained expression of programmed cell death protein 1 (PD-1). However, the …

Differential natural killer cell–mediated inhibition of HIV-1 replication based on distinct KIR/HLA subtypes

…, JD Lifson, TM Allen, M Carrington, M Altfeld - The Journal of …, 2007 - rupress.org
Decline of peak viremia during acute HIV-1 infection occurs before the development of
vigorous adaptive immunity, and the level of decline correlates inversely with the rate of AIDS …

[PDF][PDF] Efficient ablation of genes in human hematopoietic stem and effector cells using CRISPR/Cas9

…, D Bryder, K Musunuru, H Brand, AM Tager, TM Allen… - Cell stem cell, 2014 - cell.com
Genome editing via CRISPR/Cas9 has rapidly become the tool of choice by virtue of its efficacy
and ease of use. However, CRISPR/Cas9-mediated genome editing in clinically relevant …

HIV-1 adaptation to NK-cell-mediated immune pressure

…, M Martin, B Li, SI Khakoo, M Carrington, TM Allen… - Nature, 2011 - nature.com
Natural killer (NK) cells have an important role in the control of viral infections, recognizing
virally infected cells through a variety of activating and inhibitory receptors 1 , 2 , 3 . …

Influence of HLA-B57 on clinical presentation and viral control during acute HIV-1 infection

…, GY Xu, R Draenert, MN Johnston, D Strick, TM Allen… - Aids, 2003 - journals.lww.com
Background: HLA-B57, as well as cytotoxic T-lymphocyte (CTL) responses restricted by this
allele, have been strongly associated with long-term non-progressive chronic HIV-1 infection…

[PDF][PDF] Naturally occurring dominant resistance mutations to hepatitis C virus protease and polymerase inhibitors in treatment‐naive patients

…, T Marion, BW Birren, MR Henn, TM Allen - …, 2008 - Wiley Online Library
Resistance mutations to hepatitis C virus (HCV) nonstructural protein 3 (NS3) protease
inhibitors in <1% of the viral quasispecies may still allow >1000‐fold viral load reductions upon …

[HTML][HTML] Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection

…, M Altfeld, BW Birren, BD Walker, TM Allen - PLoS …, 2012 - journals.plos.org
Deep sequencing technologies have the potential to transform the study of highly variable
viral pathogens by providing a rapid and cost-effective approach to sensitively characterize …

Selective Escape from CD8+ T-Cell Responses Represents a Major Driving Force of Human Immunodeficiency Virus Type 1 (HIV-1) Sequence Diversity and Reveals …

TM Allen, M Altfeld, SC Geer, ET Kalife… - Journal of …, 2005 - Am Soc Microbiol
The sequence diversity of human immunodeficiency virus type 1 (HIV-1) represents a major
obstacle to the development of an effective vaccine, yet the forces impacting the evolution of …

[HTML][HTML] HLA Alleles Associated with Delayed Progression to AIDS Contribute Strongly to the Initial CD8+ T Cell Response against HIV-1

M Altfeld, ET Kalife, Y Qi, H Streeck, M Lichterfeld… - PLoS …, 2006 - journals.plos.org
Background Very little is known about the immunodominance patterns of HIV-1-specific T cell
responses during primary HIV-1 infection and the reasons for human lymphocyte antigen (…