User profiles for Tom L Kaufmann
Tom Lukas KaufmannMax Delbrueck Center for Molecular Medicine Verified email at mdc-berlin.de Cited by 104 |
[HTML][HTML] MEDICC2: whole-genome doubling aware copy-number phylogenies for cancer evolution
Aneuploidy, chromosomal instability, somatic copy-number alterations, and whole-genome
doubling (WGD) play key roles in cancer evolution and provide information for the complex …
doubling (WGD) play key roles in cancer evolution and provide information for the complex …
Improved identification of cancer mutational processes
TL Kaufmann, RF Schwarz - Nature Genetics, 2024 - nature.com
Mutational signatures help to deconvolve the different processes that shape cancer
genomes. A new tool now alleviates some of the persistent challenges in the field.
genomes. A new tool now alleviates some of the persistent challenges in the field.
SMITH: spatially constrained stochastic model for simulation of intra-tumour heterogeneity
… Tom L Kaufmann , Tom L Kaufmann … The authors wish it to be known that, in their
opinion, Adam Streck and Tom L Kaufmann should be regarded as Joint First Authors. …
opinion, Adam Streck and Tom L Kaufmann should be regarded as Joint First Authors. …
[HTML][HTML] Refphase: Multi-sample phasing reveals haplotype-specific copy number heterogeneity
…, EC Colliver, MR Huska, TL Kaufmann… - PLoS computational …, 2023 - journals.plos.org
Most computational methods that infer somatic copy number alterations (SCNAs) from bulk
sequencing of DNA analyse tumour samples individually. However, the sequencing of …
sequencing of DNA analyse tumour samples individually. However, the sequencing of …
[HTML][HTML] Electrostatic and bending energies predict staggering and splaying in nonmuscle myosin II minifilaments
TL Kaufmann, US Schwarz - PLoS computational biology, 2020 - journals.plos.org
Recent experiments with super-resolution live cell microscopy revealed that nonmuscle myosin
II minifilaments are much more dynamic than formerly appreciated, often showing plastic …
II minifilaments are much more dynamic than formerly appreciated, often showing plastic …
Refphase: Multi-sample reference phasing reveals haplotype-specific copy number heterogeneity
Most computational methods that infer somatic copy number alterations (SCNAs) from bulk
sequencing of DNA analyse tumour samples individually. However, the sequencing of …
sequencing of DNA analyse tumour samples individually. However, the sequencing of …
Copy-number dosage regulates telomere maintenance and disease-associated pathways in neuroblastoma
…, R Monti, VM Dombrowe, MS de Biase, TL Kaufmann… - bioRxiv, 2022 - biorxiv.org
Telomere maintenance in neuroblastoma is linked to poor outcome and caused by either
TERT activation or through alternative lengthening of telomeres (ALT). In contrast to TERT …
TERT activation or through alternative lengthening of telomeres (ALT). In contrast to TERT …
Liabilities of foreignness revisited: A review of contemporary studies and recommendations for future research
N Denk, L Kaufmann, JF Roesch - Journal of International Management, 2012 - Elsevier
The concept of liabilities of foreignness (LOFs) describes the additional costs that multinational
enterprises have to face relative to their indigenous competitors when operating in …
enterprises have to face relative to their indigenous competitors when operating in …
A retrospective cohort study on patients with lentigo maligna melanoma
SM Fröhlich, S Cazzaniga, LS Kaufmann, RE Hunger… - Dermatology, 2019 - karger.com
Background: More epidemiological data about lentigo maligna melanoma (LMM) are required
to define follow-up guidelines. The study focused on recurrence, progression, and overall …
to define follow-up guidelines. The study focused on recurrence, progression, and overall …
Reverse auctions––grounded theory from the buyer and supplier perspective
CR Carter, L Kaufmann, S Beall, PL Carter… - … Research Part E …, 2004 - Elsevier
Supply chain relationships are increasingly impacted by the use of the Internet and the adoption
of logistics technology. In this paper we report the results of a large-scale field study of a …
of logistics technology. In this paper we report the results of a large-scale field study of a …