User profiles for Tomer Kalisky

Tomer Kalisky

Associate Professor of Bioengineering, Bar-Ilan University
Verified email at biu.ac.il
Cited by 8560

Association of reactive oxygen species levels and radioresistance in cancer stem cells

M Diehn, RW Cho, NA Lobo, T Kalisky, MJ Dorie… - nature, 2009 - nature.com
The metabolism of oxygen, although central to life, produces reactive oxygen species (ROS)
that have been implicated in processes as diverse as cancer, cardiovascular disease and …

Single-cell genomics

T Kalisky, SR Quake - Nature methods, 2011 - nature.com
Methods for genomic analysis at single-cell resolution enable new understanding of
complex biological phenomena. Single-cell techniques, ranging from flow cytometry and …

Genomic analysis at the single-cell level

T Kalisky, P Blainey, SR Quake - Annual review of genetics, 2011 - annualreviews.org
Studying complex biological systems such as a developing embryo, a tumor, or a microbial
ecosystem often involves understanding the behavior and heterogeneity of the individual …

Single-cell dissection of transcriptional heterogeneity in human colon tumors

P Dalerba, T Kalisky, D Sahoo, PS Rajendran… - Nature …, 2011 - nature.com
Cancer is often viewed as a caricature of normal developmental processes, but the extent to
which its cellular heterogeneity truly recapitulates multilineage differentiation processes of …

Quantitative assessment of single-cell RNA-sequencing methods

AR Wu, NF Neff, T Kalisky, P Dalerba, B Treutlein… - Nature …, 2014 - nature.com
Interest in single-cell whole-transcriptome analysis is growing rapidly, especially for profiling
rare or heterogeneous populations of cells. We compared commercially available single-…

[HTML][HTML] CDX2 as a prognostic biomarker in stage II and stage III colon cancer

…, S Hisamori, J Hutchison, T Kalisky… - … England Journal of …, 2016 - Mass Medical Soc
Background The identification of high-risk stage II colon cancers is key to the selection of
patients who require adjuvant treatment after surgery. Microarray-based multigene-expression …

Immunization and epidemic dynamics in complex networks

N Madar, T Kalisky, R Cohen, D Ben-avraham… - The European Physical …, 2004 - Springer
We study the behavior of epidemic spreading in networks, and, in particular, scale free
networks. We use the Susceptible-Infected-Removed (SIR) epidemiological model. We give …

Identification of a cKit+ colonic crypt base secretory cell that supports Lgr5+ stem cells in mice

ME Rothenberg, Y Nusse, T Kalisky, JJ Lee, P Dalerba… - Gastroenterology, 2012 - Elsevier
BACKGROUND & AIMS: Paneth cells contribute to the small intestinal niche of Lgr5 + stem
cells. Although the colon also contains Lgr5 + stem cells, it does not contain Paneth cells. We …

Microfluidic single-cell real-time PCR for comparative analysis of gene expression patterns

V Sanchez-Freire, AD Ebert, T Kalisky, SR Quake… - Nature protocols, 2012 - nature.com
Single-cell quantitative real-time PCR (qRT-PCR) combined with high-throughput arrays
allows the analysis of gene expression profiles at a molecular level in approximately 11 h after …

A cell-intrinsic role for TLR2–MYD88 in intestinal and breast epithelia and oncogenesis

…, M Van De Rijn, FM Dirbas, G Somlo, T Kalisky… - Nature cell …, 2014 - nature.com
It has been postulated that there is a link between inflammation and cancer. Here we
describe a role for cell-intrinsic toll-like receptor-2 (TLR2; which is involved in inflammatory …