User profiles for Tracey A. Ruhlman
tracey ruhlmanuniversity of Texas at Austin Verified email at austin.utexas.edu Cited by 3390 |
Plastid genomes of seed plants
RK Jansen, TA Ruhlman - Genomics of chloroplasts and mitochondria, 2012 - Springer
The field of comparative plastid genomics has burgeoned during the past decade, largely
due to the availability of rapid, less expensive genome sequencing technologies. Currently …
due to the availability of rapid, less expensive genome sequencing technologies. Currently …
The plastid genomes of flowering plants
TA Ruhlman, RK Jansen - Chloroplast biotechnology: methods and …, 2014 - Springer
The plastid genome (plastome) has proved a valuable source of data for evaluating
evolutionary relationships among angiosperms. Through basic and applied approaches, plastid …
evolutionary relationships among angiosperms. Through basic and applied approaches, plastid …
Plastid genome sequences of legumes reveal parallel inversions and multiple losses of rps16 in papilionoids
EN Schwarz, TA Ruhlman, JSM Sabir… - … of Systematics and …, 2015 - Wiley Online Library
To date, publicly available plastid genomes of legumes have for the most part been limited
to the subfamily Papilionoideae. Here we report 13 new plastid genomes of legumes …
to the subfamily Papilionoideae. Here we report 13 new plastid genomes of legumes …
[HTML][HTML] NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss
Background Key innovations have facilitated novel niche utilization, such as the movement
of the algal predecessors of land plants into terrestrial habitats where drastic fluctuations in …
of the algal predecessors of land plants into terrestrial habitats where drastic fluctuations in …
Expansion of inverted repeat does not decrease substitution rates in Pelargonium plastid genomes
For species with minor inverted repeat ( IR ) boundary changes in the plastid genome (plastome),
nucleotide substitution rates were previously shown to be lower in the IR than the …
nucleotide substitution rates were previously shown to be lower in the IR than the …
Dynamic evolution of Geranium mitochondrial genomes through multiple horizontal and intracellular gene transfers
The exchange of genetic material between cellular organelles through intracellular gene
transfer ( IGT ) or between species by horizontal gene transfer ( HGT ) has played an important …
transfer ( IGT ) or between species by horizontal gene transfer ( HGT ) has played an important …
[HTML][HTML] Highly resolved papilionoid legume phylogeny based on plastid phylogenomics
Comprising 501 genera and around 14,000 species, Papilionoideae is not only the largest
subfamily of Fabaceae (Leguminosae; legumes), but also one of the most extraordinarily …
subfamily of Fabaceae (Leguminosae; legumes), but also one of the most extraordinarily …
Variable presence of the inverted repeat and plastome stability in Erodium
…, M Govindu, J Zhang, ML Weng, TA Ruhlman - Annals of …, 2016 - academic.oup.com
Background and Aims Several unrelated lineages such as plastids, viruses and plasmids,
have converged on quadripartite genomes of similar size with large and small single copy …
have converged on quadripartite genomes of similar size with large and small single copy …
[HTML][HTML] Complete sequences of organelle genomes from the medicinal plant Rhazya stricta(Apocynaceae) and contrasting patterns of mitochondrial genome …
Background Rhazya stricta is native to arid regions in South Asia and the Middle East and is
used extensively in folk medicine to treat a wide range of diseases. In addition to generating …
used extensively in folk medicine to treat a wide range of diseases. In addition to generating …
Recombination‐dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure
TA Ruhlman, J Zhang, JC Blazier… - American Journal of …, 2017 - Wiley Online Library
PREMISE OF THE STUDY: There is a misinterpretation in the literature regarding the variable
orientation of the small single copy region of plastid genomes (plastomes). The common …
orientation of the small single copy region of plastid genomes (plastomes). The common …