SARS-CoV-2 genome-wide T cell epitope mapping reveals immunodominance and substantial CD8+ T cell activation in COVID-19 patients

SK Saini, DS Hersby, T Tamhane, HR Povlsen… - Science …, 2021 - science.org
T cells are important for effective viral clearance, elimination of virus-infected cells, and long-term
disease protection. To examine the full spectrum of CD8 + T cell immunity in COVID-19…

[HTML][HTML] Neoantigen-specific CD8 T cell responses in the peripheral blood following PD-L1 blockade might predict therapy outcome in metastatic urothelial carcinoma

…, P Wong, H Al-Ahmadie, G Iyer, T Tamhane… - Nature …, 2022 - nature.com
CD8 + T cell reactivity towards tumor mutation-derived neoantigens is widely believed to
facilitate the antitumor immunity induced by immune checkpoint blockade (ICB). Here we show …

[HTML][HTML] Human endogenous retroviruses form a reservoir of T cell targets in hematological cancers

…, AK Bentzen, AM Marquard, T Tamhane… - Nature …, 2020 - nature.com
Human endogenous retroviruses (HERV) form a substantial part of the human genome, but
mostly remain transcriptionally silent under strict epigenetic regulation, yet can potentially be …

[HTML][HTML] CD8+ T cells from patients with narcolepsy and healthy controls recognize hypocretin neuron-specific antigens

…, AK Bentzen, AM Marquard, T Tamhane… - Nature …, 2019 - nature.com
Narcolepsy Type 1 (NT1) is a neurological sleep disorder, characterized by the loss of
hypocretin/orexin signaling in the brain. Genetic, epidemiological and experimental data support …

Empty peptide-receptive MHC class I molecules for efficient detection of antigen-specific T cells

SK Saini, T Tamhane, R Anjanappa, A Saikia… - Science …, 2019 - science.org
The peptide-dependent stability of MHC class I molecules poses a substantial challenge for
their use in peptide-MHC multimer–based approaches to comprehensively analyze T cell …

[HTML][HTML] High expression of the cysteine proteinase legumain in colorectal cancer–Implications for therapeutic targeting

…, SJ Pettersen, EV Egeland, T Tamhane… - European journal of …, 2015 - Elsevier
Background The cysteine proteinase legumain is highly expressed in cancer. Legumain is a
potential biomarker and has been suggested to be utilised for prodrug activation in cancer …

[HTML][HTML] Nuclear cathepsin L activity is required for cell cycle progression of colorectal carcinoma cells

T Tamhane, S Lu, GM Maelandsmo, MH Haugen… - Biochimie, 2016 - Elsevier
Prominent tasks of cysteine cathepsins involve endo-lysosomal proteolysis and turnover of
extracellular matrix constituents or plasma membrane proteins for maintenance of intestinal …

[HTML][HTML] Three doses of BNT162b2 COVID-19 mRNA vaccine establish long-lasting CD8+ T cell immunity in CLL and MDS patients

…, DS Hersby, KK Munk, T Tamhane… - Frontiers in …, 2023 - frontiersin.org
Patients with hematological malignancies are prioritized for COVID-19 vaccine due to their
high risk for severe SARS-CoV-2 infection-related disease and mortality. To understand T cell …

Proteolysis mediated by cysteine cathepsins and legumain—recent advances and cell biological challenges

…, J McInnes, A Al-Hashimi, M Rehders, T Tamhane… - Protoplasma, 2015 - Springer
Proteases play essential roles in protein degradation, protein processing, and extracellular
matrix remodeling in all cell types and tissues. They are also involved in protein turnover for …

[HTML][HTML] TCR-engaging scaffolds selectively expand antigen-specific T-cells with a favorable phenotype for adoptive cell therapy

…, JSH Ternander, C Heeke, T Tamhane… - … for immunotherapy of …, 2023 - ncbi.nlm.nih.gov
Background Adoptive cell therapy (ACT) has shown promising results for the treatment of
cancer and viral infections. Successful ACT relies on ex vivo expansion of large numbers of …