User profiles for Troy Kieran

Troy J. Kieran

Influenza Division, Centers for Disease Control and Prevention
Verified email at cdc.gov
Cited by 1560

[HTML][HTML] Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)

TC Glenn, RA Nilsen, TJ Kieran, JG Sanders… - PeerJ, 2019 - peerj.com
Massively parallel DNA sequencing offers many benefits, but major inhibitory cost factors
include:(1) start-up (ie, purchasing initial reagents and equipment);(2) buyin (ie, getting the …

Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADS eq)

…, AG McArthur, DR Boreham, T Kieran… - Molecular ecology …, 2015 - Wiley Online Library
Degraded DNA from suboptimal field sampling is common in molecular ecology. However, its
impact on techniques that use restriction site associated next‐generation DNA sequencing …

RAD cap: sequence capture of dual‐digest RAD seq libraries with identifiable duplicates and reduced missing data

SL Hoffberg, TJ Kieran, JM Catchen… - Molecular ecology …, 2016 - Wiley Online Library
Molecular ecologists seek to genotype hundreds to thousands of loci from hundreds to
thousands of individuals at minimal cost per sample. Current methods, such as restriction‐site‐…

[HTML][HTML] Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD)

NJ Bayona-Vásquez, TC Glenn, TJ Kieran, TW Pierson… - PeerJ, 2019 - peerj.com
Molecular ecologists frequently use genome reduction strategies that rely upon restriction
enzyme digestion of genomic DNA to sample consistent portions of the genome from many …

Adapterama I: universal stubs and primers for thousands of dual-indexed Illumina libraries (iTru & iNext)

TC Glenn, RA Nilsen, TJ Kieran, JW Finger Jr… - BioRxiv, 2016 - biorxiv.org
Next-generation DNA sequencing (NGS) offers many benefits, but major factors limiting NGS
include reducing the time and costs associated with: 1) start-up (ie, doing NGS for the first …

Co‐occurrence of antibiotic, biocide, and heavy metal resistance genes in bacteria from metal and radionuclide contaminated soils at the Savannah River Site

JC Thomas IV, A Oladeinde, TJ Kieran… - Microbial …, 2020 - Wiley Online Library
Contaminants such as heavy metals may contribute to the dissemination of antimicrobial
resistance (AMR) by enriching resistance gene determinants via co‐selection mechanisms. In …

[HTML][HTML] Comparison of the ruminal and fecal microbiotas in beef calves supplemented or not with concentrate

JM Lourenco, TJ Kieran, DS Seidel, TC Glenn… - PloS one, 2020 - journals.plos.org
Most of the research efforts involving the bovine gastrointestinal microbiota have focused on
cattle’s forestomach, particularly the rumen, so information concerning the bovine fecal …

Conflicting Evolutionary Histories of the Mitochondrial and Nuclear Genomes in New World Myotis Bats

…, BC Faircloth, KAM Sullivan, TJ Kieran… - Systematic …, 2018 - academic.oup.com
The rapid diversification of Myotis bats into more than 100 species is one of the most
extensive mammalian radiations available for study. Efforts to understand relationships within …

[HTML][HTML] Adapterama II: universal amplicon sequencing on Illumina platforms (TaggiMatrix)

TC Glenn, TW Pierson, NJ Bayona-Vásquez, TJ Kieran… - PeerJ, 2019 - peerj.com
Next-generation sequencing (NGS) of amplicons is used in a wide variety of contexts. In
many cases, NGS amplicon sequencing remains overly expensive and inflexible, with library …

Ultraconserved elements reconstruct the evolution of Chagas disease‐vectoring kissing bugs (Reduviidae: Triatominae)

TJ Kieran, ERL Gordon… - Systematic …, 2021 - Wiley Online Library
Triatominae are the largest radiation of haematophagous species within the true bugs (Hemiptera)
and the sole vectors of Trypanosoma cruzi Chagas, the causative agent of Chagas …