[HTML][HTML] Analysis of protein-coding genetic variation in 60,706 humans

…, GM Peloso, R Poplin, MA Rivas, V Ruano-Rubio… - Nature, 2016 - nature.com
Large-scale reference data sets of human genetic variation are critical for the medical and
functional interpretation of DNA sequence changes. Here we describe the aggregation and …

[HTML][HTML] The mutational constraint spectrum quantified from variation in 141,456 humans

…, S Novod, N Petrillo, D Roazen, V Ruano-Rubio… - Nature, 2020 - nature.com
Genetic variants that inactivate protein-coding genes are a powerful source of information
about the phenotypic consequences of gene disruption: genes that are crucial for the function …

Scaling accurate genetic variant discovery to tens of thousands of samples

R Poplin, V Ruano-Rubio, MA DePristo, TJ Fennell… - BioRxiv, 2017 - biorxiv.org
Comprehensive disease gene discovery in both common and rare diseases will require the
efficient and accurate detection of all classes of genetic variation across tens to hundreds of …

[HTML][HTML] A structural variation reference for medical and population genetics

…, J Fu, G Tiao, KM Laricchia, V Ruano-Rubio… - Nature, 2020 - nature.com
Structural variants (SVs) rearrange large segments of DNA 1 and can have profound
consequences in evolution and human disease 2 , 3 . As national biobanks, disease-association …

Variation across 141,456 human exomes and genomes reveals the spectrum of loss-of-function intolerance across human protein-coding genes

…, S Novod, N Petrillo, D Roazen, V Ruano-Rubio… - biorxiv, 2019 - biorxiv.org
Genetic variants that inactivate protein-coding genes are a powerful source of information
about the phenotypic consequences of gene disruption: genes critical for an organism’s …

Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia

…, M Sanders, C Hubbart, G Maslen, V Ruano-Rubio… - Nature …, 2013 - nature.com
We describe an analysis of genome variation in 825 P. falciparum samples from Asia and
Africa that identifies an unusual pattern of parasite population structure at the epicenter of …

[HTML][HTML] Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

…, S Oyola, MA Quail, DJ Turner, V Ruano-Rubio… - Nature, 2012 - nature.com
Malaria elimination strategies require surveillance of the parasite population for genetic
changes that demand a public health response, such as new forms of drug resistance 1 , 2 . …

A genome-wide mutational constraint map quantified from variation in 76,156 human genomes

…, S Novod, L Bergelson, D Roazen, V Ruano-Rubio… - BioRxiv, 2022 - biorxiv.org
The depletion of disruptive variation caused by purifying natural selection (constraint) has
been widely used to investigate protein-coding genes underlying human disorders, but …

A genomic mutational constraint map using variation in 76,156 human genomes

…, S Novod, L Bergelson, D Roazen, V Ruano-Rubio… - Nature, 2024 - nature.com
The depletion of disruptive variation caused by purifying natural selection (constraint) has
been widely used to investigate protein-coding genes underlying human disorders 1 , 2 , 3 – 4 …

Indels, structural variation, and recombination drive genomic diversity in Plasmodium falciparum

A Miles, Z Iqbal, P Vauterin, R Pearson… - Genome …, 2016 - genome.cshlp.org
The malaria parasite Plasmodium falciparum has a great capacity for evolutionary adaptation
to evade host immunity and develop drug resistance. Current understanding of parasite …