An estimate of the total number of true human miRNAs
While the number of human miRNA candidates continuously increases, only a few of them
are completely characterized and experimentally validated. Toward determining the total …
are completely characterized and experimentally validated. Toward determining the total …
PLSDB: a resource of complete bacterial plasmids
V Galata, T Fehlmann, C Backes… - Nucleic acids …, 2019 - academic.oup.com
The study of bacterial isolates or communities requires the analysis of the therein included
plasmids in order to provide an extensive characterization of the organisms. Plasmids …
plasmids in order to provide an extensive characterization of the organisms. Plasmids …
[HTML][HTML] PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data
Background Pathogenic microorganisms cause disease by invading, colonizing, and
damaging their host. Virulence factors including bacterial toxins contribute to pathogenicity. …
damaging their host. Virulence factors including bacterial toxins contribute to pathogenicity. …
Evaluating the use of circulating microRNA profiles for lung cancer detection in symptomatic patients
Importance The overall low survival rate of patients with lung cancer calls for improved
detection tools to enable better treatment options and improved patient outcomes. Multivariable …
detection tools to enable better treatment options and improved patient outcomes. Multivariable …
[HTML][HTML] miRNAs can be generally associated with human pathologies as exemplified for miR-144
…, B Vogel, C Backes, A ElSharawy, V Galata… - BMC medicine, 2014 - Springer
Background miRNA profiles are promising biomarker candidates for a manifold of human
pathologies, opening new avenues for diagnosis and prognosis. Beyond studies that describe …
pathologies, opening new avenues for diagnosis and prognosis. Beyond studies that describe …
BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation
CC Laczny, C Kiefer, V Galata, T Fehlmann… - Nucleic acids …, 2017 - academic.oup.com
Metagenomics-based studies of mixed microbial communities are impacting biotechnology,
life sciences and medicine. Computational binning of metagenomic data is a powerful …
life sciences and medicine. Computational binning of metagenomic data is a powerful …
[HTML][HTML] High-throughput qRT-PCR validation of blood microRNAs in non-small cell lung cancer
P Leidinger, T Brefort, C Backes, M Krapp, V Galata… - Oncotarget, 2016 - ncbi.nlm.nih.gov
Validation of biomarkers is essential to advance the translational process to clinical
application. Although there exists an increasing number of reports on small non-coding RNAs (…
application. Although there exists an increasing number of reports on small non-coding RNAs (…
Effects of resistant starch on symptoms, fecal markers, and gut microbiota in Parkinson's disease—the RESISTA-PD trial
…, L Gröger, N Grammes, V Galata… - Genomics …, 2022 - academic.oup.com
The composition of the gut microbiota is linked to multiple diseases, including Parkinson’s
disease (PD). Abundance of bacteria producing short-chain fatty acids (SCFAs) and fecal …
disease (PD). Abundance of bacteria producing short-chain fatty acids (SCFAs) and fecal …
Prioritizing and selecting likely novel miRNAs from NGS data
…, N Ludwig, P Leidinger, B Vogel, V Galata… - Nucleic acids …, 2016 - academic.oup.com
Small non-coding RNAs play a key role in many physiological and pathological processes.
Since 2004, miRNA sequences have been catalogued in miRBase, which is currently in its …
Since 2004, miRNA sequences have been catalogued in miRBase, which is currently in its …
Validating Alzheimer's disease micro RNAs using next-generation sequencing
…, C Deuschle, D Berg, C Ruschil, V Galata… - Alzheimer's & …, 2016 - Elsevier
Introduction Molecular biomarkers for Alzheimer's disease (AD) can support detection and
improved care for patients, but novel candidates require verification. We previously reported a …
improved care for patients, but novel candidates require verification. We previously reported a …