[PDF][PDF] Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes

…, P Rothe, AL Mattei, T Zehnder, D Harnett, V Laupert… - Cell, 2022 - cell.com
Regulatory landscapes drive complex developmental gene expression, but it remains unclear
how their integrity is maintained when incorporating novel genes and functions during …

[HTML][HTML] Integration of Hi-C with short and long-read genome sequencing reveals the structure of germline rearranged genomes

…, US Melo, H Moeinzadeh, D Heller, V Laupert… - Nature …, 2022 - nature.com
Structural variants are a common cause of disease and contribute to a large extent to inter-individual
variability, but their detection and interpretation remain a challenge. Here, we …

CENTRE: a gradient boosting algorithm for Cell-type-specific ENhancer-Target pREdiction

…, S Lopez Ruiz De Vargas, PA Omgba, V Laupert… - …, 2023 - academic.oup.com
Motivation Identifying target promoters of active enhancers is a crucial step for realizing gene
regulation and deciphering phenotypes and diseases. Up to now, several computational …

Promoter repression and 3D-restructuring resolves divergent developmental gene expression in TADs

…, P Rothe, AL Mattei, T Zehnder, D Harnett, V Laupert… - BioRxiv, 2021 - biorxiv.org
Cohesin loop extrusion facilitates precise gene expression by continuously driving promoters
to sample all enhancers located within the same topologically-associated domain (TAD). …

Association Plots: visualizing cluster-specific associations in high-dimensional correspondence analysis biplots

E Gralinska, M Vingron - Journal of the Royal Statistical Society …, 2023 - academic.oup.com
… We thank our colleagues Robert Schöpflin, Peter Holderrieth, and Verena Laupert (née
Heinrich) for providing feedback and criticism on the developing manuscript. …

[HTML][HTML] Influence of chitosan treatment on surrogate serum markers of cholesterol metabolism in obese subjects

D Lütjohann, M Marinova, K Wolter, W Willinek… - Nutrients, 2018 - mdpi.com
Chitosan treatment results in significantly lower serum low density lipoprotein (LDL) cholesterol
concentrations. To assess the working mechanisms of chitosan, we measured serum …