A global reference for human genetic variation

…, E Boerwinkle, H Doddapaneni, Y Han, V Korchina… - Nature, 2015 - cdr.lib.unc.edu
The 1000 Genomes Project set out to provide a comprehensive description of common human
genetic variation by applying whole-genome sequencing to a diverse set of individuals …

[PDF][PDF] Comprehensive and integrative genomic characterization of hepatocellular carcinoma

…, J Hu, M Wang, D Morton, V Korchina… - Cell, 2017 - cell.com
Liver cancer has the second highest worldwide cancer mortality rate and has limited
therapeutic options. We analyzed 363 hepatocellular carcinoma (HCC) cases by whole-exome …

[PDF][PDF] Integrated molecular characterization of testicular germ cell tumors

…, D Hughes, K Covington, JC Jayaseelan, V Korchina… - Cell reports, 2018 - cell.com
We studied 137 primary testicular germ cell tumors (TGCTs) using high-dimensional assays
of genomic, epigenomic, transcriptomic, and proteomic features. These tumors exhibited …

[HTML][HTML] The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

…, TS Kaiser, D Kalra, NJ Kenny, V Korchina… - PLoS …, 2014 - journals.plos.org
Myriapods (eg, centipedes and millipedes) display a simple homonomous body plan relative
to other arthropods. All members of the class are terrestrial, but they attained terrestriality …

[PDF][PDF] A massive expansion of effector genes underlies gall-formation in the wheat pest Mayetiola destructor

…, SN Jhangiani, AJ Johnson, D Kalra, V Korchina… - Current Biology, 2015 - cell.com
Gall-forming arthropods are highly specialized herbivores that, in combination with their
hosts, produce extended phenotypes with unique morphologies [1]. Many are economically …

Proteogenomic markers of chemotherapy resistance and response in triple-negative breast cancer

…, Y Dou, X Gou, C Huang, Z Shi, B Wen, V Korchina… - Cancer discovery, 2022 - AACR
Proteogenomic analysis of triple-negative breast tumors revealed a complex landscape of
chemotherapy response associations, including a 19q13.31–33 somatic deletion encoding …

[PDF][PDF] Molecular features of cancers exhibiting exceptional responses to treatment

…, J Hu, DM Muzny, H Doddapaneni, V Korchina… - Cancer cell, 2021 - cell.com
A small fraction of cancer patients with advanced disease survive significantly longer than
patients with clinically comparable tumors. Molecular mechanisms for exceptional responses …

[PDF][PDF] Harmonizing clinical sequencing and interpretation for the eMERGE III network

…, B Klanderman, E Klee, DC Kochan, V Korchina… - The American Journal of …, 2019 - cell.com
The advancement of precision medicine requires new methods to coordinate and deliver
genetic data from heterogeneous sources to physicians and patients. The eMERGE III Network …

[HTML][HTML] Implementation of preemptive DNA sequence–based pharmacogenomics testing across a large academic medical center: The Mayo-Baylor RIGHT 10K Study

…, E Venner, X Qin, J Hu, CL Kovar, V Korchina… - Genetics in …, 2022 - Elsevier
Purpose The Mayo-Baylor RIGHT 10K Study enabled preemptive, sequence-based
pharmacogenomics (PGx)-driven drug prescribing practices in routine clinical care within a large …

[PDF][PDF] Genomic signatures of cooperation and conflict in the social amoeba

…, SL Lee, CL Kovar, HH Dinh, V Korchina… - Current Biology, 2015 - cell.com
Cooperative systems are susceptible to invasion by selfish individuals that profit from receiving
the social benefits but fail to contribute. These so-called "cheaters" can have a fitness …