User profiles for Vishal B. Siramshetty

Vishal B. Siramshetty

Genentech, Inc.
Verified email at gene.com
Cited by 868

WITHDRAWN—a resource for withdrawn and discontinued drugs

VB Siramshetty, J Nickel, C Omieczynski… - Nucleic acids …, 2016 - academic.oup.com
Post-marketing drug withdrawals can be associated with various events, ranging from safety
issues such as reported deaths or severe side-effects, to a multitude of non-safety problems …

TCRD and Pharos 2021: mining the human proteome for disease biology

…, SL Mathias, KJ Kelleher, VB Siramshetty… - Nucleic Acids …, 2021 - academic.oup.com
In 2014, the National Institutes of Health (NIH) initiated the Illuminating the Druggable Genome
(IDG) program to identify and improve our understanding of poorly characterized proteins …

Pharos 2023: an integrated resource for the understudied human proteome

…, JJ Yang, VT Metzger, VB Siramshetty… - Nucleic acids …, 2023 - academic.oup.com
The Illuminating the Druggable Genome (IDG) project aims to improve our understanding of
understudied proteins and our ability to study them in the context of disease biology by …

SuperDRUG2: a one stop resource for approved/marketed drugs

VB Siramshetty, OA Eckert, BO Gohlke… - Nucleic acids …, 2018 - academic.oup.com
Regular monitoring of drug regulatory agency web sites and similar resources for information
on new drug approvals and changes to legal status of marketed drugs is impractical. It …

Large-scale modeling of multispecies acute toxicity end points using consensus of multitask deep learning methods

S Jain, VB Siramshetty, VM Alves… - Journal of chemical …, 2021 - ACS Publications
Computational methods to predict molecular properties regarding safety and toxicology
represent alternative approaches to expedite drug development, screen environmental …

Critical assessment of artificial intelligence methods for prediction of hERG channel inhibition in the “big data” era

VB Siramshetty, DT Nguyen, NJ Martinez… - Journal of Chemical …, 2020 - ACS Publications
The rise of novel artificial intelligence (AI) methods necessitates their benchmarking against
classical machine learning for a typical drug-discovery project. Inhibition of the potassium …

NCATS Inxight Drugs: a comprehensive and curated portal for translational research

VB Siramshetty, I Grishagin, ÐT Nguyễn… - Nucleic Acids …, 2022 - academic.oup.com
The United States has a complex regulatory scheme for marketing drugs. Understanding drug
regulatory status is a daunting task that requires integrating data from many sources from …

[HTML][HTML] Computational methods for prediction of in vitro effects of new chemical structures

P Banerjee, VB Siramshetty, MN Drwal… - Journal of …, 2016 - Springer
Background With a constant increase in the number of new chemicals synthesized every
year, it becomes important to employ the most reliable and fast in silico screening methods to …

How to illuminate the druggable genome using pharos

T Sheils, SL Mathias, VB Siramshetty… - Current protocols in …, 2020 - Wiley Online Library
Pharos is an integrated web‐based informatics platform for the analysis of data aggregated
by the Illuminating the Druggable Genome (IDG) Knowledge Management Center, an NIH …

The Catch-22 of predicting hERG blockade using publicly accessible bioactivity data

VB Siramshetty, Q Chen, P Devarakonda… - Journal of Chemical …, 2018 - ACS Publications
Drug-induced inhibition of the human ether-à-go-go-related gene (hERG)-encoded potassium
ion channels can lead to fatal cardiotoxicity. Several marketed drugs and promising drug …