User profiles for Vivek Krishnakumar
Vivek KrishnakumarIllumina Inc. Verified email at illumina.com Cited by 4447 |
[HTML][HTML] The Medicago genome provides insight into the evolution of rhizobial symbioses
Legumes (Fabaceae or Leguminosae) are unique among cultivated plants for their ability to
carry out endosymbiotic nitrogen fixation with rhizobial bacteria, a process that takes place …
carry out endosymbiotic nitrogen fixation with rhizobial bacteria, a process that takes place …
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome
CY Cheng, V Krishnakumar, AP Chan… - The Plant …, 2017 - Wiley Online Library
The flowering plant Arabidopsis thaliana is a dicot model organism for research in many
aspects of plant biology. A comprehensive annotation of its genome paves the way for …
aspects of plant biology. A comprehensive annotation of its genome paves the way for …
[HTML][HTML] Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea
…, WE Clarke, CD Town, J Nixon, V Krishnakumar… - Genome biology, 2014 - Springer
Background Brassica oleracea is a valuable vegetable species that has contributed to human
health and nutrition for hundreds of years and comprises multiple distinct cultivar groups …
health and nutrition for hundreds of years and comprises multiple distinct cultivar groups …
[HTML][HTML] An improved genome release (version Mt4. 0) for the model legume Medicago truncatula
Background Medicago truncatula, a close relative of alfalfa, is a preeminent model for studying
nitrogen fixation, symbiosis, and legume genomics. The Medicago sequencing project …
nitrogen fixation, symbiosis, and legume genomics. The Medicago sequencing project …
ePlant: visualizing and exploring multiple levels of data for hypothesis generation in plant biology
A big challenge in current systems biology research arises when different types of data must
be accessed from separate sources and visualized using separate tools. The high cognitive …
be accessed from separate sources and visualized using separate tools. The high cognitive …
Araport: the Arabidopsis information portal
V Krishnakumar, MR Hanlon, S Contrino… - Nucleic acids …, 2015 - academic.oup.com
The Arabidopsis Information Portal ( https://www.araport.org ) is a new online resource for
plant biology research. It houses the Arabidopsis thaliana genome sequence and associated …
plant biology research. It houses the Arabidopsis thaliana genome sequence and associated …
Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome
10.7554/eLife.19090.001 The germline genome of the binucleated ciliate Tetrahymena
thermophila undergoes programmed chromosome breakage and massive DNA elimination to …
thermophila undergoes programmed chromosome breakage and massive DNA elimination to …
MarkerMiner 1.0: A new application for phylogenetic marker development using angiosperm transcriptomes
Premise of the study: Targeted sequencing using next‐generation sequencing (NGS)
platforms offers enormous potential for plant systematics by enabling economical acquisition of …
platforms offers enormous potential for plant systematics by enabling economical acquisition of …
MTGD: The Medicago truncatula Genome Database
V Krishnakumar, M Kim, BD Rosen… - Plant and Cell …, 2015 - academic.oup.com
Medicago truncatula, a close relative of alfalfa (Medicago sativa), is a model legume used
for studying symbiotic nitrogen fixation, mycorrhizal interactions and legume genomics. J. …
for studying symbiotic nitrogen fixation, mycorrhizal interactions and legume genomics. J. …
An 'eFP‐Seq Browser'for visualizing and exploring RNA sequencing data
…, SR Watharkar, AP Chan, V Krishnakumar… - The Plant …, 2019 - Wiley Online Library
Improvements in next‐generation sequencing technologies have resulted in dramatically
reduced sequencing costs. This has led to an explosion of ‘‐seq’‐based methods, of which …
reduced sequencing costs. This has led to an explosion of ‘‐seq’‐based methods, of which …