User profiles for Vladimir Kubyshkin

Vladimir Kubyshkin

Research Associate at the University of Manitoba (Canada)
Verified email at umanitoba.ca
Cited by 1486

Controlling biological activity with light: diarylethene‐containing cyclic peptidomimetics

…, S Reiβer, PK Mykhailiuk, VS Kubyshkin… - Angewandte …, 2014 - Wiley Online Library
Photobiological processes in nature are usually triggered by nonpeptidic chromophores or
by modified side chains. A system is presented in which the polypeptide backbone itself can …

Biocatalysis with unnatural amino acids: enzymology meets xenobiology

…, CG Acevedo‐Rocha, V Kubyshkin… - Angewandte Chemie …, 2017 - Wiley Online Library
The goal of xenobiology is to design biological systems endowed with unusual biochemical
functions, whereas enzymology concerns the study of enzymes, the workhorses of …

Entropic contribution of elongation factor P to proline positioning at the catalytic center of the ribosome

LK Doerfel, I Wohlgemuth, V Kubyshkin… - Journal of the …, 2015 - ACS Publications
The peptide bond formation with the amino acid proline (Pro) on the ribosome is slow,
resulting in translational stalling when several Pro have to be incorporated into the peptide. …

[HTML][HTML] Halogenation of tyrosine perturbs large-scale protein self-organization

H Sun, H Jia, O Kendall, J Dragelj, V Kubyshkin… - Nature …, 2022 - nature.com
Protein halogenation is a common non-enzymatic post-translational modification contributing
to aging, oxidative stress-related diseases and cancer. Here, we report a genetically …

Synthesis of multifunctional spirocyclic azetidines and their application in drug discovery

…, SA Zozulya, PO Borysko, V Kubyshkin… - … A European Journal, 2018 - Wiley Online Library
The synthesis of multifunctional spirocycles was achieved from common cyclic carboxylic
acids (cyclobutane carboxylate, cyclopentane carboxylate, l‐proline, etc.). The whole …

[HTML][HTML] γ-(S)-Trifluoromethyl proline: evaluation as a structural substitute of proline for solid state 19 F-NMR peptide studies

V Kubyshkin, S Afonin, S Kara, N Budisa… - Organic & …, 2015 - pubs.rsc.org
γ-(4S)-Trifluoromethyl proline was synthesised according to a modified literature protocol with
improved yield on a multigram scale. Conformational properties of the amide bond formed …

Multiomics Analysis Provides Insight into the Laboratory Evolution of Escherichia coli toward the Metabolic Usage of Fluorinated Indoles

…, L Sinn, D Petras, CJ Schipp, V Kubyshkin… - ACS Central …, 2020 - ACS Publications
Organofluorine compounds are known to be toxic to a broad variety of living beings in
different habitats, and chemical fluorination has been historically exploited by mankind for the …

A 19F NMR Label to Substitute Polar Amino Acids in Peptides: A CF3‐Substituted Analogue of Serine and Threonine

…, DS Radchenko, VS Kubyshkin… - Angewandte Chemie …, 2013 - Wiley Online Library
Structural biology relies heavily on NMR studies of peptides and proteins that are uniformly
or selectively labeled with NMR-active isotopes (2H, 13C, 15N, 19F). One of the most …

Peptidyl-prolyl model study: how does the electronic effect influence the amide bond conformation?

PK Mykhailiuk, V Kubyshkin, T Bach… - The Journal of organic …, 2017 - ACS Publications
The triple-helical structure of collagen, the most abundant protein in animal bodies, owes its
stability to post-translationally installed hydroxyl groups at position 4 of prolyl residues. To …

Stabilization of the triple helix in collagen mimicking peptides

V Kubyshkin - Organic & Biomolecular Chemistry, 2019 - pubs.rsc.org
Collagen mimics are peptides designed to reproduce structural features of natural collagen.
A triple helix is the first element in the hierarchy of collagen folding. It is an assembly of three …