User profiles for Vladimir Potapov

Vladimir Potapov

- Verified email at neb.com - Cited by 1962

Vladimir N. Potapov

- Verified email at math.nsc.ru - Cited by 835

[BOOK][B] The multiplicative structure of J-contractive matrix functions

VP Potapov - 1960 - books.google.com
… VP POTAPOV … 132 VP POTAPOV … 134 VP POTAPOV

[HTML][HTML] Examining sources of error in PCR by single-molecule sequencing

V Potapov, JL Ong - PloS one, 2017 - journals.plos.org
Next-generation sequencing technology has enabled the detection of rare genetic or somatic
mutations and contributed to our understanding of disease progression and evolution. …

Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details

V Potapov, M Cohen, G Schreiber - Protein engineering, design …, 2009 - academic.oup.com
Methods for protein modeling and design advanced rapidly in recent years. At the heart of
these computational methods is an energy function that calculates the free energy of the …

Organoelement chemistry: Promising growth areas and challenges

…, SV Amosova, NK Gusarova, VA Potapov… - Russian Chemical …, 2018 - iopscience.iop.org
The chemistry of organoelement compounds is now one of the most rapidly developing fields
of research, regarding both fundamental science and solution of applied problems. This …

Comprehensive profiling of four base overhang ligation fidelity by T4 DNA ligase and application to DNA assembly

V Potapov, JL Ong, RB Kucera… - ACS synthetic …, 2018 - ACS Publications
Synthetic biology relies on the manufacture of large and complex DNA constructs from
libraries of genetic parts. Golden Gate and other Type IIS restriction enzyme-dependent DNA …

Community-wide assessment of protein-interface modeling suggests improvements to design methodology

…, O Schueler-Furman, Y Inbar, V Potapov… - Journal of molecular …, 2011 - Elsevier
The CAPRI (Critical Assessment of Predicted Interactions) and CASP (Critical Assessment
of protein Structure Prediction) experiments have demonstrated the power of community-wide …

The limit of accuracy of protein modeling: influence of crystal packing on protein structure

E Eyal, S Gerzon, V Potapov, M Edelman… - Journal of molecular …, 2005 - Elsevier
The size of the protein database (PDB) makes it now feasible to arrive at statistical conclusions
regarding structural effects of crystal packing. These effects are relevant for setting upper …

Thia-, aza-, and selena [3.3. 1] bicyclononane dichlorides: Rates vs internal nucleophile in anchimeric assistance

AA Accurso, SH Cho, A Amin, VA Potapov… - The Journal of …, 2011 - ACS Publications
Sulfur-, selenium-, and nitrogen-containing compounds bearing leaving groups in the β-position
undergo facile substitution chemistry enabled by anchimeric assistance. Here we …

Base modifications affecting RNA polymerase and reverse transcriptase fidelity

V Potapov, X Fu, N Dai, IR Corrêa Jr… - Nucleic Acids …, 2018 - academic.oup.com
Ribonucleic acid (RNA) is capable of hosting a variety of chemically diverse modifications,
in both naturally-occurring post-transcriptional modifications and artificial chemical …

Rapid 40 kb genome construction from 52 parts through data-optimized assembly design

JM Pryor, V Potapov, K Bilotti, N Pokhrel… - ACS Synthetic …, 2022 - ACS Publications
Large DNA constructs (>10 kb) are invaluable tools for genetic engineering and the
development of therapeutics. However, the manufacture of these constructs is laborious, often …