[HTML][HTML] A high-speed search engine pLink 2 with systematic evaluation for proteome-scale identification of cross-linked peptides

…, WF Zeng, YH Ding, D Tan, L Wu, WJ Zhou… - Nature …, 2019 - nature.com
We describe pLink 2, a search engine with higher speed and reliability for proteome-scale
identification of cross-linked peptides. With a two-stage open search strategy facilitated by …

Polymerized lyotropic liquid crystal assemblies for materials applications

…, W Gu, BA Pindzola, WJ Zhou - Accounts of chemical …, 2001 - ACS Publications
The development of functional materials with nanometer-scale architectures and the effect of
these architectures on their chemical and physical properties are currently of great interest …

Comprehensive identification of peptides in tandem mass spectra using an efficient open search engine

H Chi, C Liu, H Yang, WF Zeng, L Wu, WJ Zhou… - Nature …, 2018 - nature.com
We present a sequence-tag-based search engine, Open-pFind, to identify peptides in an
ultra-large search space that includes coeluting peptides, unexpected modifications and …

MS/MS spectrum prediction for modified peptides using pDeep2 trained by transfer learning

WF Zeng, XX Zhou, WJ Zhou, H Chi, J Zhan… - Analytical …, 2019 - ACS Publications
In the past decade, tandem mass spectrometry (MS/MS)-based bottom-up proteomics has
become the method of choice for analyzing post-translational modifications (PTMs) in complex …

Crizotinib (PF‐02341066) reverses multidrug resistance in cancer cells by inhibiting the function of P‐glycoprotein

W Zhou, X Zhang, C Cheng, F Wang… - British journal of …, 2012 - Wiley Online Library
BACKGROUND AND PURPOSE Besides targeting the well‐known oncogenic c‐Met, crizotinib
is the first oral tyrosine kinase inhibitor inhibiting anaplastic lymphoma kinase (ALK) in …

pNovo 3: precise de novo peptide sequencing using a learning-to-rank framework

H Yang, H Chi, WF Zeng, WJ Zhou, SM He - Bioinformatics, 2019 - academic.oup.com
Motivation De novo peptide sequencing based on tandem mass spectrometry data is the
key technology of shotgun proteomics for identifying peptides without any database and …

Synthesis and water absorbency of the copolymer of acrylamide with anionic monomers

KJ Yao, WJ Zhou - Journal of Applied Polymer Science, 1994 - Wiley Online Library
A series of novel copolymer superabsorbents based on acrylamide, sodium allylsulfonate,
sodium acrylate, and N,N′‐methylenebisacrylamide were prepared by copolymerization. …

Hemispherectomy outcome prediction scale: development and validation of a seizure freedom prediction tool

…, X Zhou, KM Lin, LX Cai, QZ Liu, JL Lin, WJ Zhou… - …, 2021 - Wiley Online Library
Objective To develop and validate a model to predict seizure freedom in children undergoing
cerebral hemispheric surgery for the treatment of drug‐resistant epilepsy. Methods We …

Phase retrieval based on transport of intensity and digital holography

WJ Zhou, X Guan, F Liu, YJ Yu, H Zhang, TC Poon… - Applied …, 2018 - opg.optica.org
We propose a technique in which intensity images are reconstructed from a digital hologram
to provide inputs for the transport-of-intensity equation for unwrapped phase recovery. By …

Synthesis of novel adsorbent S-SiO2@ Fe3O4 based on strong bonding of SO-Se for selenium removal in water

…, XP Ma, XL Duan, Q Guo, SL Niu, WJ Zhou… - Journal of …, 2023 - Elsevier
Industrial activities always result in out of limits of selenium [Se(IV) and Se(VI)] in aqueous,
which seriously threatens human health. The sulfur loaded magnetic microspheres (SLMM) …