User profiles for Wenbao Yu

Wenbao Yu

University of Pennsylvania & Children's Hospital of Philadelphia
Verified email at chop.edu
Cited by 1025

Integrative bulk and single-cell profiling of premanufacture T-cell populations reveals factors mediating long-term persistence of CAR T-cell therapy

…, CH Chen, S Bandyopadhyay, YY Ding, Y Uzun, W Yu… - Cancer Discovery, 2021 - AACR
To improve clinical outcomes for CAR T-cell therapy, there is a need to understand the
molecular determinants of CAR T-cell persistence. These data represent the largest clinically …

Developmental trajectory of prehematopoietic stem cell formation from endothelium

…, Y Li, ED Howell, M Mumau, W Yu… - Blood, The Journal …, 2020 - ashpublications.org
Hematopoietic stem and progenitor cells (HSPCs) in the bone marrow are derived from a
small population of hemogenic endothelial (HE) cells located in the major arteries of the …

Single-cell multiomics reveals increased plasticity, resistant populations, and stem-cell–like blasts in KMT2A-rearranged leukemia

C Chen, W Yu, F Alikarami, Q Qiu… - Blood, The Journal …, 2022 - ashpublications.org
KMT2A-rearranged (KMT2A-r) infant acute lymphoblastic leukemia (ALL) is a devastating
malignancy with a dismal outcome, and younger age at diagnosis is associated with increased …

[HTML][HTML] Identifying topologically associating domains and subdomains by Gaussian Mixture model And Proportion test

W Yu, B He, K Tan - Nature communications, 2017 - nature.com
The spatial organization of the genome plays a critical role in regulating gene expression.
Recent chromatin interaction mapping studies have revealed that topologically associating …

[PDF][PDF] Spatial genome re-organization between fetal and adult hematopoietic stem cells

C Chen, W Yu, J Tober, P Gao, B He, K Lee, T Trieu… - Cell reports, 2019 - cell.com
Fetal hematopoietic stem cells (HSCs) undergo a developmental switch to become adult
HSCs with distinct functional properties. To better understand the molecular mechanisms …

[HTML][HTML] scATAC-pro: a comprehensive workbench for single-cell chromatin accessibility sequencing data

W Yu, Y Uzun, Q Zhu, C Chen, K Tan - Genome biology, 2020 - Springer
Single-cell chromatin accessibility sequencing has become a powerful technology for
understanding epigenetic heterogeneity of complex tissues. However, there is a lack of open-…

RUNX1 is required in granulocyte–monocyte progenitors to attenuate inflammatory cytokine production by neutrophils

…, AJ Minn, W Tong, PP Liu, K Tan, W Yu… - Genes & …, 2023 - genesdev.cshlp.org
The transcription factor RUNX1 is mutated in familial platelet disorder with associated myeloid
malignancy (FPDMM) and in sporadic myelodysplastic syndrome and leukemia. RUNX1 …

A unified model based multifactor dimensionality reduction framework for detecting gene–gene interactions

W Yu, S Lee, T Park - Bioinformatics, 2016 - academic.oup.com
Motivation Gene–gene interaction (GGI) is one of the most popular approaches for finding
and explaining the missing heritability of common complex traits in genome-wide association …

Absence of biopolymers in surface waters inhibits flocs growth in winter: A secret of coagulation over decades

Z Su, X Wu, W Yu, T Liu, X Li, M Liu, W Yu - Journal of Cleaner Production, 2022 - Elsevier
Factors responsible for undesirable coagulation performance in winter have not been well
understood by far. The aim of this work is to identify the critical factor(s) and to provide …

Multivariate quantitative multifactor dimensionality reduction for detecting gene-gene interactions

W Yu, MS Kwon, T Park - Human heredity, 2015 - karger.com
Objectives: To determine gene-gene interactions and missing heritability of complex diseases
is a challenging topic in genome-wide association studies. The multifactor dimensionality …