[HTML][HTML] A mechanism for the activation of the mechanosensitive Piezo1 channel by the small molecule Yoda1
Mechanosensitive Piezo1 and Piezo2 channels transduce various forms of mechanical
forces into cellular signals that play vital roles in many important biological processes in …
forces into cellular signals that play vital roles in many important biological processes in …
[HTML][HTML] Probing the gating mechanism of the mechanosensitive channel Piezo1 with the small molecule Yoda1
JJ Lacroix, WM Botello-Smith, Y Luo - Nature communications, 2018 - nature.com
Piezo proteins are transmembrane ion channels which transduce many forms of mechanical
stimuli into electrochemical signals. Their pore, formed by the assembly of three identical …
stimuli into electrochemical signals. Their pore, formed by the assembly of three identical …
Robust determination of protein allosteric signaling pathways
WM Botello-Smith, Y Luo - Journal of chemical theory and …, 2019 - ACS Publications
To understand how protein function changes upon an allosteric perturbation, such as ligand
binding and mutation, significant progress in characterizing allosteric network from …
binding and mutation, significant progress in characterizing allosteric network from …
[HTML][HTML] Crowding-induced opening of the mechanosensitive Piezo1 channel in silico
W Jiang, JS Del Rosario, W Botello-Smith… - Communications …, 2021 - nature.com
Mechanosensitive Piezo1 channels are essential mechanotransduction proteins in
eukaryotes. Their curved transmembrane domains, called arms, create a convex membrane …
eukaryotes. Their curved transmembrane domains, called arms, create a convex membrane …
Can relative binding free energy predict selectivity of reversible covalent inhibitors?
P Chatterjee, WM Botello-Smith, H Zhang… - Journal of the …, 2017 - ACS Publications
Reversible covalent inhibitors have many clinical advantages over noncovalent or irreversible
covalent drugs. However, apart from selecting a warhead, substantial efforts in design and …
covalent drugs. However, apart from selecting a warhead, substantial efforts in design and …
[HTML][HTML] Molecular mechanism of resveratrol's lipid membrane protection
Q Fei, D Kent, WM Botello-Smith, F Nur, S Nur… - Scientific reports, 2018 - nature.com
Resveratrol, a natural compound found in red wine and various vegetables, has drawn
increasing interest due to its reported benefit in cardiovascular protection, neurodegenerative …
increasing interest due to its reported benefit in cardiovascular protection, neurodegenerative …
Applications of MMPBSA to Membrane Proteins I: Efficient Numerical Solutions of Periodic Poisson–Boltzmann Equation
WM Botello-Smith, R Luo - Journal of chemical information and …, 2015 - ACS Publications
Continuum solvent models have been widely used in biomolecular modeling applications.
Recently much attention has been given to inclusion of implicit membranes into existing …
Recently much attention has been given to inclusion of implicit membranes into existing …
Modeling membrane protein–ligand binding interactions: the human purinergic platelet receptor
DA Greene, WM Botello-Smith, A Follmer… - The Journal of …, 2016 - ACS Publications
Membrane proteins, due to their roles as cell receptors and signaling mediators, make prime
candidates for drug targets. The computational analysis of protein–ligand binding affinities …
candidates for drug targets. The computational analysis of protein–ligand binding affinities …
Numerical Poisson–Boltzmann model for continuum membrane systems
Membrane protein systems are important computational research topics due to their roles in
rational drug design. In this study, we developed a continuum membrane model utilizing a …
rational drug design. In this study, we developed a continuum membrane model utilizing a …
Ion pairing and dielectric decrement in glycosaminoglycan brushes
JD Sterling, W Jiang, WM Botello-Smith… - The Journal of Physical …, 2021 - ACS Publications
Cell–surface polysaccharides are essential to many aspects of physiology, serving as a
highly conserved evolutionary feature of life and as an important part of the innate immune …
highly conserved evolutionary feature of life and as an important part of the innate immune …