Co-translational protein folding: progress and methods

M Thommen, W Holtkamp, MV Rodnina - Current opinion in structural …, 2017 - Elsevier
Highlights • Proteins begin to fold within the polypeptide exit tunnel of the ribosome. • Ribosomes
change the landscape of protein folding. • Ribosomes can stabilize non-native compact …

Structural basis for the inhibition of the eukaryotic ribosome

N Garreau de Loubresse, I Prokhorova, W Holtkamp… - Nature, 2014 - nature.com
The ribosome is a molecular machine responsible for protein synthesis and a major target
for small-molecule inhibitors. Compared to the wealth of structural information available on …

Cotranslational protein folding on the ribosome monitored in real time

W Holtkamp, G Kokic, M Jäger, J Mittelstaet, AA Komar… - Science, 2015 - science.org
Protein domains can fold into stable tertiary structures while they are synthesized on the
ribosome. We used a high-performance, reconstituted in vitro translation system to investigate …

MCP-1 induces migration of adult neural stem cells

D Widera, W Holtkamp, F Entschladen… - European journal of cell …, 2004 - Elsevier
As a model for brain inflammation we previously studied transcriptional profiles of tumor
necrosis factor-α (TNF)-treated U373 astroglioma cells. In previous work we were able to …

GTP hydrolysis by EF‐G synchronizes t RNA movement on small and large ribosomal subunits

W Holtkamp, CE Cunha, F Peske, AL Konevega… - The EMBO …, 2014 - embopress.org
Elongation factor G ( EF ‐ G ) promotes the movement of two tRNA s and the mRNA through
the ribosome in each cycle of peptide elongation. During translocation, the tRNA s …

[HTML][HTML] Interplay between trigger factor and other protein biogenesis factors on the ribosome

T Bornemann, W Holtkamp, W Wintermeyer - Nature communications, 2014 - nature.com
Nascent proteins emerging from translating ribosomes in bacteria are screened by a number
of ribosome-associated protein biogenesis factors, among them the chaperone trigger …

Dynamic switch of the signal recognition particle from scanning to targeting

W Holtkamp, S Lee, T Bornemann… - Nature structural & …, 2012 - nature.com
Ribosomes synthesizing inner membrane proteins in Escherichia coli are targeted to the
membrane by the signal recognition particle (SRP) pathway. By rapid kinetic analysis we show …

Dual use of GTP hydrolysis by elongation factor G on the ribosome

CE Cunha, R Belardinelli, F Peske, W Holtkamp… - …, 2013 - Taylor & Francis
Elongation factor G (EF-G) is a GTPase that catalyzes tRNA and mRNA translocation during
the elongation cycle of protein synthesis. The GTP-bound state of the factor on the ribosome …

Synchronous tRNA movements during translocation on the ribosome are orchestrated by elongation factor G and GTP hydrolysis

W Holtkamp, W Wintermeyer, MV Rodnina - Bioessays, 2014 - Wiley Online Library
The translocation of tRNAs through the ribosome proceeds through numerous small steps in
which tRNAs gradually shift their positions on the small and large ribosomal subunits. The …

Dynamics of ribosomes and release factors during translation termination in E. coli

…, P Karki, C Maracci, I Wohlgemuth, W Holtkamp… - Elife, 2018 - elifesciences.org
10.7554/eLife.34252.001 Release factors RF1 and RF2 promote hydrolysis of peptidyl-tRNA
during translation termination. The GTPase RF3 promotes recycling of RF1 and RF2. Using …