User profiles for Xinshuai Qi

Xinshuai Qi (祁新帅)

Deloitte
Verified email at deloitte.com
Cited by 3022

The Amborella Genome and the Evolution of Flowering Plants

…, G Li, L Li, J Liu, H Ma, BC Meyers, J Park, X Qi… - Science, 2013 - science.org
Introduction Darwin famously characterized the rapid rise and early diversification of flowering
plants (angiosperms) in the fossil record as an “abominable mystery.” Identifying genomic …

A targeted enrichment strategy for massively parallel sequencing of angiosperm plastid genomes

…, NA Douglas, HR Kates, X Qi… - Applications in plant …, 2013 - Wiley Online Library
• Premise of the study: We explored a targeted enrichment strategy to facilitate rapid and low‐cost
next‐generation sequencing (NGS) of numerous complete plastid genomes from …

[HTML][HTML] Transcriptome and organellar sequencing highlights the complex origin and diversification of allotetraploid Brassica napus

H An, X Qi, ML Gaynor, Y Hao, SC Gebken… - Nature …, 2019 - nature.com
Brassica napus, an allotetraploid crop, is hypothesized to be a hybrid from unknown varieties
of Brassica rapa and Brassica oleracea. Despite the economic importance of B. napus, …

Brassica rapa Domestication: Untangling Wild and Feral Forms and Convergence of Crop Morphotypes

…, AP Ragsdale, ME Mabry, X Qi… - Molecular biology …, 2021 - academic.oup.com
The study of domestication contributes to our knowledge of evolution and crop genetic
resources. Human selection has shaped wild Brassica rapa into diverse turnip, leafy, and oilseed …

More than one way to evolve a weed: parallel evolution of US weedy rice through independent genetic mechanisms

X Qi, Y Liu, CC Vigueira, ND Young… - Molecular …, 2015 - Wiley Online Library
Many different crop species were selected for a common suite of ‘domestication traits’, which
facilitates their use for studies of parallel evolution. Within domesticated rice (Oryza sativa), …

Genomic inferences of domestication events are corroborated by written records in Brassica rapa

X Qi, H An, AP Ragsdale, TE Hall… - Molecular …, 2017 - Wiley Online Library
Demographic modelling is often used with population genomic data to infer the relationships
and ages among populations. However, relatively few analyses are able to validate these …

Call of the wild rice: Oryza rufipogon shapes weedy rice evolution in Southeast Asia

CC Vigueira, X Qi, BK Song, LF Li… - Evolutionary …, 2019 - Wiley Online Library
Agricultural weeds serve as productive models for studying the genetic basis of rapid
adaptation, with weed‐adaptive traits potentially evolving multiple times independently in …

Molecular data and ecological niche modelling reveal a highly dynamic evolutionary history of the East Asian Tertiary relict Cercidiphyllum (Cercidiphyllaceae)

XS Qi, C Chen, HP Comes, S Sakaguchi… - New …, 2012 - Wiley Online Library
• East Asia’s temperate deciduous forests served as sanctuary for Tertiary relict trees, but their
ages and response to past climate change remain largely unknown. To address this issue, …

The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible

…, H An, RS Abrahams, JD Washburn, X Qi… - Genome …, 2021 - genome.cshlp.org
The members of the tribe Brassiceae share a whole-genome triplication (WGT), and one
proposed model for its formation is a two-step pair of hybridizations producing hexaploid …

Climate oscillation during the Quaternary associated with landscape heterogeneity promoted allopatric lineage divergence of a temperate tree Kalopanax …

S Sakaguchi, YX QIU, YIHUI LIU, XINS QI… - Molecular …, 2012 - Wiley Online Library
We investigated the biogeographic history of Kalopanax septemlobus, one of the most
widespread temperate tree species in East Asia, using a combined phylogeographic and …