User profiles for Y. Anselmetti
Yoann AnselmettiPost-Doc - CoBIUS Lab - University of Sherbrooke Verified email at usherbrooke.ca Cited by 251 |
Haplotype divergence supports long-term asexuality in the oribatid mite Oppiella nova
…, P Tran Van, C Bluhm, Y Anselmetti… - Proceedings of the …, 2021 - National Acad Sciences
Sex strongly impacts genome evolution via recombination and segregation. In the absence
of these processes, haplotypes within lineages of diploid organisms are predicted to …
of these processes, haplotypes within lineages of diploid organisms are predicted to …
Convergent consequences of parthenogenesis on stick insect genomes
The shift from sexual reproduction to parthenogenesis has occurred repeatedly in animals,
but how the loss of sex affects genome evolution remains poorly understood. We generated …
but how the loss of sex affects genome evolution remains poorly understood. We generated …
DeCoSTAR: Reconstructing the ancestral organization of genes or genomes using reconciled phylogenies
DeCoSTAR is a software that aims at reconstructing the organization of ancestral genes or
genomes in the form of sets of neighborhood relations (adjacencies) between pairs of …
genomes in the form of sets of neighborhood relations (adjacencies) between pairs of …
[HTML][HTML] Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies
… Colours for each fraction are the same as in a, y-axes vary for each assembly with maxima
of 120 for Anopheles coluzzii to 5000 for Anopheles maculatus. Results for Anopheles …
of 120 for Anopheles coluzzii to 5000 for Anopheles maculatus. Results for Anopheles …
[HTML][HTML] A bird's white-eye view on avian sex chromosome evolution
Chromosomal organization is relatively stable among avian species, especially with regards
to sex chromosomes. Members of the large Sylvioidea clade however have a pair of neo-…
to sex chromosomes. Members of the large Sylvioidea clade however have a pair of neo-…
First annotated draft genomes of nonmarine ostracods (Ostracoda, Crustacea) with different reproductive modes
Ostracods are one of the oldest crustacean groups with an excellent fossil record and high
importance for phylogenetic analyses but genome resources for this class are still lacking. We …
importance for phylogenetic analyses but genome resources for this class are still lacking. We …
[HTML][HTML] Ancestral gene synteny reconstruction improves extant species scaffolding
We exploit the methodological similarity between ancestral genome reconstruction and extant
genome scaffolding. We present a method, called ARt-DeCo that constructs neighborhood …
genome scaffolding. We present a method, called ARt-DeCo that constructs neighborhood …
Comparative methods for reconstructing ancient genome organization
Comparative genomics considers the detection of similarities and differences between
extant genomes, and, based on more or less formalized hypotheses regarding the involved …
extant genomes, and, based on more or less formalized hypotheses regarding the involved …
[HTML][HTML] Phylogenetic signal from rearrangements in 18 Anopheles species by joint scaffolding extant and ancestral genomes
… The different methods results are plotted with the precision on the Y axis and the recall
on the X axis. For ADSEQ and AD, results for three different adjacency support thresholds (0.1, …
on the X axis. For ADSEQ and AD, results for three different adjacency support thresholds (0.1, …
Gene tree and species tree reconciliation with endosymbiotic gene transfer
Y Anselmetti, N El-Mabrouk, M Lafond… - …, 2021 - academic.oup.com
… of grafting a binary node, also creating a new leaf y and an edge (x, y). In the latter case, we
say that y is a grafted leaf. Species and gene trees: The species tree S for a set R of species …
say that y is a grafted leaf. Species and gene trees: The species tree S for a set R of species …