[PDF][PDF] Class I HDACs share a common mechanism of regulation by inositol phosphates
CJ Millard, PJ Watson, I Celardo, Y Gordiyenko… - Molecular cell, 2013 - cell.com
Class I histone deacetylases (HDAC1, HDAC2, and HDAC3) are recruited by cognate
corepressor proteins into specific transcriptional repression complexes that target HDAC activity to …
corepressor proteins into specific transcriptional repression complexes that target HDAC activity to …
Ribosome-dependent activation of stringent control
A Brown, IS Fernández, Y Gordiyenko… - Nature, 2016 - nature.com
In order to survive, bacteria continually sense, and respond to, environmental fluctuations.
Stringent control represents a key bacterial stress response to nutrient starvation 1 , 2 that …
Stringent control represents a key bacterial stress response to nutrient starvation 1 , 2 that …
Oxygenase-catalyzed ribosome hydroxylation occurs in prokaryotes and humans
…, MM Mackeen, JS Mccullagh, Y Gordiyenko… - Nature chemical …, 2012 - nature.com
The finding that oxygenase-catalyzed protein hydroxylation regulates animal transcription
raises questions as to whether the translation machinery and prokaryotic proteins are …
raises questions as to whether the translation machinery and prokaryotic proteins are …
Structure of a human 48S translational initiation complex
J Brito Querido, M Sokabe, S Kraatz, Y Gordiyenko… - Science, 2020 - science.org
A key step in translational initiation is the recruitment of the 43S preinitiation complex by the
cap-binding complex [eukaryotic initiation factor 4F (eIF4F)] at the 5′ end of messenger …
cap-binding complex [eukaryotic initiation factor 4F (eIF4F)] at the 5′ end of messenger …
Architecture of eukaryotic mRNA 3′-end processing machinery
Newly transcribed eukaryotic precursor messenger RNAs (pre-mRNAs) are processed at
their 3′ ends by the ~1-megadalton multiprotein cleavage and polyadenylation factor (CPF). …
their 3′ ends by the ~1-megadalton multiprotein cleavage and polyadenylation factor (CPF). …
[HTML][HTML] Structural basis for the inhibition of translation through eIF2α phosphorylation
Y Gordiyenko, JL Llácer, V Ramakrishnan - Nature communications, 2019 - nature.com
One of the responses to stress by eukaryotic cells is the down-regulation of protein synthesis
by phosphorylation of translation initiation factor eIF2. Phosphorylation results in low …
by phosphorylation of translation initiation factor eIF2. Phosphorylation results in low …
Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition
10.7554/eLife.39273.001 In eukaryotic translation initiation, AUG recognition of the mRNA
requires accommodation of Met-tRNA i in a ‘P IN ’ state, which is antagonized by the factor …
requires accommodation of Met-tRNA i in a ‘P IN ’ state, which is antagonized by the factor …
[HTML][HTML] eIF2B is a decameric guanine nucleotide exchange factor with a γ2ε2 tetrameric core
Y Gordiyenko, C Schmidt, MD Jennings… - Nature …, 2014 - nature.com
eIF2B facilitates and controls protein synthesis in eukaryotes by mediating guanine nucleotide
exchange on its partner eIF2. We combined mass spectrometry (MS) with chemical cross-…
exchange on its partner eIF2. We combined mass spectrometry (MS) with chemical cross-…
Translational termination without a stop codon
NR James, A Brown, Y Gordiyenko, V Ramakrishnan - Science, 2016 - science.org
… We thank Y. Shimizu for providing the arfA clone, AC Kelley for providing tRNA, RS Hegde …
We thank Y. Shimizu for providing the arfA clone, AC Kelley for providing tRNA, RS Hegde for …
We thank Y. Shimizu for providing the arfA clone, AC Kelley for providing tRNA, RS Hegde for …
Analysis of the subunit organization of the eIF2B complex reveals new insights into its structure and regulation
NC Wortham, M Martinez, Y Gordiyenko… - The FASEB …, 2014 - Wiley Online Library
Eukaryotic initiation factor 2B (eIF2B) is the guanine nucleotide exchange factor for eIF2
and a critical regulator of protein synthesis, (eg., as part of the integrated stress response). …
and a critical regulator of protein synthesis, (eg., as part of the integrated stress response). …