Prediction of acute myeloid leukaemia risk in healthy individuals

…, N Barda, PC Zuzarte, L Heisler, Y Sundaravadanam… - Nature, 2018 - nature.com
The incidence of acute myeloid leukaemia (AML) increases with age and mortality exceeds
90% when diagnosed after age 65. Most cases arise without any detectable early symptoms …

Childhood cerebellar tumours mirror conserved fetal transcriptional programs

…, H Farooq, BL Holgado, Y Sundaravadanam… - Nature, 2019 - nature.com
Study of the origin and development of cerebellar tumours has been hampered by the
complexity and heterogeneity of cerebellar cells that change over the course of development. …

[HTML][HTML] Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

…, J Davis, D Wood, S Williams, Y Sundaravadanam… - Genome biology, 2011 - Springer
Background We present the genome sequence of the tammar wallaby, Macropus eugenii,
which is a member of the kangaroo family and the first representative of the iconic hopping …

Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line

…, CS Chin, T Beck, Y Sundaravadanam… - Genome …, 2018 - genome.cshlp.org
The SK-BR-3 cell line is one of the most important models for HER2+ breast cancers, which
affect one in five breast cancer patients. SK-BR-3 is known to be highly rearranged, although …

[HTML][HTML] Early Cancer Detection in Li–Fraumeni Syndrome with Cell-Free DNA

…, B Lam, BE Lujan Toro, K Marsh, Y Sundaravadanam… - Cancer Discovery, 2024 - AACR
By utilizing an integrated cell-free DNA approach, liquid biopsy shows earlier detection of
cancer in patients with LFS compared with current clinical surveillance methods such as …

[HTML][HTML] Epigenomic, genomic, and transcriptomic landscape of schwannomatosis

…, V Patil, F Nassiri, O Singh, Y Sundaravadanam… - Acta …, 2021 - Springer
Schwannomatosis (SWNTS) is a genetic cancer predisposition syndrome that manifests as
multiple and often painful neuronal tumors called schwannomas (SWNs). While germline …

Detection of structural rearrangements in embryos

S Madjunkova, Y Sundaravadanam… - … England Journal of …, 2020 - Mass Medical Soc
Balanced Translocations in Embryos Balanced chromosomal rearrangements are associated
with infertility and recurrent miscarriage but are difficult to detect. In this study, long-read …

[HTML][HTML] Detection of the novel SARS-CoV-2 European lineage B. 1.177 in Ontario, Canada

…, K Sivaraman, R de Borja, Y Sundaravadanam… - Journal of Clinical …, 2021 - Elsevier
Background Travel-related dissemination of SARS-CoV-2 continues to contribute to the
global pandemic. A novel SARS-CoV-2 lineage (B.1.177) reportedly arose in Spain in the …

Impact of chemical-induced mutational load increase on immune checkpoint therapy in poorly responsive murine tumors

…, A Chow, P Xu, S Man, Y Sundaravadanam… - Molecular cancer …, 2018 - AACR
A recurring historic finding in cancer drug development is encouraging antitumor effects
observed in tumor-bearing mice that fail to translate into the clinic. An intriguing exception to this …

De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis)

…, AHY Tong, K Ng, Y Sundaravadanam… - G3: Genes …, 2017 - academic.oup.com
The Canadian beaver (Castor canadensis) is the largest indigenous rodent in North America.
We report a draft annotated assembly of the beaver genome, the first for a large rodent and …