User profiles for Yasaman Karami
 | yasaman karamiINRIA - LORIA - Université de Lorraine Verified email at inria.fr Cited by 656 |
[HTML][HTML] Bat coronaviruses related to SARS-CoV-2 and infectious for human cells
The animal reservoir of SARS-CoV-2 is unknown despite reports of SARS-CoV-2-related
viruses in Asian Rhinolophus bats 1 , 2 , 3 – 4 , including the closest virus from R. affinis, …
viruses in Asian Rhinolophus bats 1 , 2 , 3 – 4 , including the closest virus from R. affinis, …
Coronaviruses with a SARS-CoV-2-like receptor-binding domain allowing ACE2-mediated entry into human cells isolated from bats of Indochinese peninsula
The animal reservoir of SARS-CoV-2 is unknown despite reports of various SARS-CoV-2-related
viruses in Asian Rhinolophus bats, including the closest virus from R. affinis, RaTG13. …
viruses in Asian Rhinolophus bats, including the closest virus from R. affinis, RaTG13. …
GEMME: a simple and fast global epistatic model predicting mutational effects
The systematic and accurate description of protein mutational landscapes is a question of
utmost importance in biology, bioengineering, and medicine. Recent progress has been …
utmost importance in biology, bioengineering, and medicine. Recent progress has been …
DaReUS-Loop: a web server to model multiple loops in homology models
Loop regions in protein structures often have crucial roles, and they are much more variable
in sequence and structure than other regions. In homology modeling, this leads to larger …
in sequence and structure than other regions. In homology modeling, this leads to larger …
[HTML][HTML] DaReUS-Loop: accurate loop modeling using fragments from remote or unrelated proteins
Despite efforts during the past decades, loop modeling remains a difficult part of protein
structure modeling. Several approaches have been developed in the framework of crystal …
structure modeling. Several approaches have been developed in the framework of crystal …
[HTML][HTML] Structural determination of Streptococcus pyogenes M1 protein interactions with human immunoglobulin G using integrative structural biology
Streptococcus pyogenes (Group A streptococcus; GAS) is an important human pathogen
responsible for mild to severe, life-threatening infections. GAS expresses a wide range of …
responsible for mild to severe, life-threatening infections. GAS expresses a wide range of …
[HTML][HTML] “Infostery” analysis of short molecular dynamics simulations identifies highly sensitive residues and predicts deleterious mutations
Characterizing a protein mutational landscape is a very challenging problem in Biology. Many
disease-associated mutations do not seem to produce any effect on the global shape nor …
disease-associated mutations do not seem to produce any effect on the global shape nor …
Exploring a Structural Data Mining Approach to Design Linkers for Head-to-Tail Peptide Cyclization
Peptides have recently regained interest as therapeutic candidates, but their development
remains confronted with several limitations including low bioavailability. Backbone head-to-…
remains confronted with several limitations including low bioavailability. Backbone head-to-…
[HTML][HTML] Dissecting protein architecture with communication blocks and communicating segment pairs
Background Proteins adapt to environmental conditions by changing their shape and motions.
Characterising protein conformational dynamics is increasingly recognised as necessary …
Characterising protein conformational dynamics is increasingly recognised as necessary …
Protein structure prediction using bio-inspired algorithm: A review
One of the main problems in Bioinformatics is the prediction of protein tertiary structure from
its amino acid sequence. This problem is computationally complex and belongs to the NP-…
its amino acid sequence. This problem is computationally complex and belongs to the NP-…