User profiles for Yasuo Yoshikuni

Yasuo Yoshikuni

DOE Joint Genome Institute
Verified email at lbl.gov
Cited by 5173

An engineered microbial platform for direct biofuel production from brown macroalgae

…, Y Kashiyama, D Baker, Y Yoshikuni - Science, 2012 - science.org
Prospecting macroalgae (seaweeds) as feedstocks for bioconversion into biofuels and
commodity chemical compounds is limited primarily by the availability of tractable …

Designed divergent evolution of enzyme function

Y Yoshikuni, TE Ferrin, JD Keasling - Nature, 2006 - nature.com
It is generally believed that proteins with promiscuous functions divergently evolved to acquire
higher specificity and activity 1 , 2 , 3 , 4 , 5 , and that this process was highly dependent …

[HTML][HTML] Microbiome engineering: synthetic biology of plant-associated microbiomes in sustainable agriculture

J Ke, B Wang, Y Yoshikuni - Trends in Biotechnology, 2021 - cell.com
To support an ever-increasing population, modern agriculture faces numerous challenges
that pose major threats to global food and energy security. Plant-associated microbes, with …

Efficient ethanol production from brown macroalgae sugars by a synthetic yeast platform

…, DJ Miller, NL Ohler, C Swimmer, Y Yoshikuni - Nature, 2014 - nature.com
The increasing demands placed on natural resources for fuel and food production require that
we explore the use of efficient, sustainable feedstocks such as brown macroalgae. The full …

Computational protein design enables a novel one-carbon assimilation pathway

…, JL Gallaher, J Bale, Y Yoshikuni… - Proceedings of the …, 2015 - National Acad Sciences
We describe a computationally designed enzyme, formolase (FLS), which catalyzes the
carboligation of three one-carbon formaldehyde molecules into one three-carbon …

Directed evolution of AraC for improved compatibility of arabinose-and lactose-inducible promoters

…, BF Pfleger, JD Newman, Y Yoshikuni… - Applied and …, 2007 - Am Soc Microbiol
Synthetic biological systems often require multiple, independently inducible promoters in
order to control the expression levels of several genes; however, cross talk between the …

[HTML][HTML] 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

…, GA Pavlopoulos, D Paez-Espino, Y Yoshikuni… - Nature …, 2017 - nature.com
We present 1,003 reference genomes that were sequenced as part of the Genomic Encyclopedia
of Bacteria and Archaea (GEBA) initiative, selected to maximize sequence coverage of …

A Novel Semi-biosynthetic Route for Artemisinin Production Using Engineered Substrate-Promiscuous P450BM3

JA Dietrich, Y Yoshikuni, KJ Fisher… - ACS chemical …, 2009 - ACS Publications
Production of fine chemicals from heterologous pathways in microbial hosts is frequently
hindered by insufficient knowledge of the native metabolic pathway and its cognate enzymes; …

[HTML][HTML] Genome-wide identification of bacterial plant colonization genes

…, G Wang, S Ul-Hasan, M McDonald, Y Yoshikuni… - PLoS …, 2017 - journals.plos.org
Diverse soil-resident bacteria can contribute to plant growth and health, but the molecular
mechanisms enabling them to effectively colonize their plant hosts remain poorly understood. …

Mono and diterpene production in Escherichia coli

KK Reiling, Y Yoshikuni, VJJ Martin… - Biotechnology and …, 2004 - Wiley Online Library
Mono‐ and diterpenoids are of great industrial and medical value as specialty chemicals and
pharmaceuticals. Production of these compounds in microbial hosts, such as Escherichia …