The KEGG resource for deciphering the genome

…, S Goto, S Kawashima, Y Okuno… - Nucleic acids …, 2004 - academic.oup.com
A grand challenge in the post‐genomic era is a complete computer representation of the cell
and the organism, which will enable computational prediction of higher‐level complexity of …

[HTML][HTML] Data mining of the public version of the FDA Adverse Event Reporting System

…, A Tamon, K Kadoyama, Y Okuno - International journal of …, 2013 - ncbi.nlm.nih.gov
The US Food and Drug Administration (FDA) Adverse Event Reporting System (FAERS,
formerly AERS) is a database that contains information on adverse event and medication error …

Identification of novel microRNA targets based on microRNA signatures in bladder cancer

T Ichimi, H Enokida, Y Okuno… - … journal of cancer, 2009 - Wiley Online Library
MicroRNAs (miRNAs) are small noncoding RNAs that negatively regulate protein-coding
genes. To identify miRNAs that have a tumor suppressive function in bladder cancer (BC), 156 …

Mice genetically deficient in vasopressin V1a and V1b receptors are resistant to jet lag

…, N Mizuguchi, J Zhang, X Dong, G Tsujimoto, Y Okuno… - Science, 2013 - science.org
Jet-lag symptoms arise from temporal misalignment between the internal circadian clock and
external solar time. We found that circadian rhythms of behavior (locomotor activity), clock …

[HTML][HTML] Extraction of protein dynamics information from cryo-EM maps using deep learning

…, M Araki, T Kato, K Terayama, Y Okuno - Nature Machine …, 2021 - nature.com
Elucidation of both the three-dimensional structure and the dynamics of a protein is essential
to understand its function. Technical breakthroughs in single-particle analysis based on …

Development of a chemical structure comparison method for integrated analysis of chemical and genomic information in the metabolic pathways

M Hattori, Y Okuno, S Goto… - Journal of the American …, 2003 - ACS Publications
Cellular functions result from intricate networks of molecular interactions, which involve not
only proteins and nucleic acids but also small chemical compounds. Here we present an …

Salt-sensitive hypertension in circadian clock–deficient Cry-null mice involves dysregulated adrenal Hsd3b6

…, H Yamada, S Haraguchi, N Emoto, Y Okuno… - Nature medicine, 2010 - nature.com
Malfunction of the circadian clock has been linked to the pathogenesis of a variety of
diseases. We show that mice lacking the core clock components Cryptochrome-1 (Cry1) and …

[HTML][HTML] Brigatinib combined with anti-EGFR antibody overcomes osimertinib resistance in EGFR-mutated non-small-cell lung cancer

…, N Inase, M Araki, M Kamada, S Sato, Y Okuno… - Nature …, 2017 - nature.com
Osimertinib has been demonstrated to overcome the epidermal growth factor receptor (EGFR)-T790M,
the most relevant acquired resistance to first-generation EGFR–tyrosine kinase …

LIGAND: database of chemical compounds and reactions in biological pathways

S Goto, Y Okuno, M Hattori, T Nishioka… - Nucleic acids …, 2002 - academic.oup.com
LIGAND is a composite database comprising three sections: COMPOUND for the information
about metabolites and other chemical compounds, REACTION for the collection of …

Two novel ALK mutations mediate acquired resistance to the next-generation ALK inhibitor alectinib

…, JF Gainor, AJ Iafrate, K Takeuchi, M Taiji, Y Okuno… - Clinical cancer …, 2014 - AACR
Purpose: The first-generation ALK tyrosine kinase inhibitor (TKI) crizotinib is a standard
therapy for patients with ALK-rearranged non–small cell lung cancer (NSCLC). Several next-…