An inflammatory aging clock (iAge) based on deep learning tracks multimorbidity, immunosenescence, frailty and cardiovascular aging

N Sayed, Y Huang, K Nguyen, Z Krejciova-Rajaniemi… - Nature aging, 2021 - nature.com
While many diseases of aging have been linked to the immunological system, immune metrics
capable of identifying the most at-risk individuals are lacking. From the blood immunome …

A tutorial on calibration measurements and calibration models for clinical prediction models

Y Huang, W Li, F Macheret, RA Gabriel… - Journal of the …, 2020 - academic.oup.com
Our primary objective is to provide the clinical informatics community with an introductory
tutorial on calibration measurements and calibration models for predictive models using …

Privacy challenges and research opportunities for genomic data sharing

L Bonomi, Y Huang, L Ohno-Machado - Nature genetics, 2020 - nature.com
The sharing of genomic data holds great promise in advancing precision medicine and providing
personalized treatments and other types of interventions. However, these opportunities …

[HTML][HTML] A consensus genome-scale reconstruction of Chinese hamster ovary cell metabolism

…, CA Orellana, D Baycin-Hizal, Y Huang… - Cell systems, 2016 - cell.com
Chinese hamster ovary (CHO) cells dominate biotherapeutic protein production and are widely
used in mammalian cell line engineering research. To elucidate metabolic bottlenecks in …

Defective sphingosine 1-phosphate receptor 1 (S1P1) phosphorylation exacerbates TH17-mediated autoimmune neuroinflammation

…, L Wu, S Acharya, A Arac, VA Blaho, Y Huang… - Nature …, 2013 - nature.com
Sphingosine 1-phosphate (S1P) signaling regulates lymphocyte egress from lymphoid organs
into systemic circulation. The sphingosine phosphate receptor 1 (S1P 1 ) agonist FTY-720 …

Enhanced Competition at the Nano–Bio Interface Enables Comprehensive Characterization of Protein Corona Dynamics and Deep Coverage of Proteomes

…, T Wang, EM Elgierari, X Zhao, Y Huang… - Advanced …, 2022 - Wiley Online Library
Introducing engineered nanoparticles (NPs) into a biofluid such as blood plasma leads to
the formation of a selective and reproducible protein corona at the particle–protein interface, …

[PDF][PDF] Atypical E2F transcriptional repressor DEL1 acts at the intersection of plant growth and immunity by controlling the hormone salicylic acid

D Chandran, J Rickert, Y Huang, MA Steinwand… - Cell host & …, 2014 - cell.com
In plants, the activation of immunity is often inversely correlated with growth. Mechanisms
that control plant growth in the context of pathogen challenge and immunity are unclear. …

[HTML][HTML] A predictive model for medical events based on contextual embedding of temporal sequences

W Farhan, Z Wang, Y Huang, S Wang… - JMIR medical …, 2016 - medinform.jmir.org
Background: Medical concepts are inherently ambiguous and error-prone due to human
fallibility, which makes it hard for them to be fully used by classical machine learning methods (…

Restoration of DNA repair mitigates genome instability and increases productivity of Chinese hamster ovary cells

…, H Hefzi, S Li, CC Kuo, Y Huang… - Biotechnology and …, 2022 - Wiley Online Library
Chinese hamster ovary (CHO) cells are the primary host for manufacturing of therapeutic
proteins. However, productivity loss is a major problem and is associated with genome …

[HTML][HTML] Modeling predictive age-dependent and age-independent symptoms and comorbidities of patients seeking treatment for COVID-19: Model development and …

Y Huang, D Radenkovic, K Perez, K Nadeau… - Journal of Medical …, 2021 - jmir.org
Background The COVID-19 pandemic continues to ravage and burden hospitals around the
world. The epidemic started in Wuhan, China, and was subsequently recognized by the …