User profiles for Yoichi Kamagata

Yoichi Kamagata

National Institute of Advanced Industrial Science and Technology (AIST), Hokkaido …
Verified email at aist.go.jp
Cited by 23540

Isolation of an archaeon at the prokaryote–eukaryote interface

…, E Tasumi, Y Yamanaka, T Yamaguchi, Y Kamagata… - Nature, 2020 - nature.com
The origin of eukaryotes remains unclear 1 , 2 , 3 – 4 . Current data suggest that eukaryotes
may have emerged from an archaeal lineage known as ‘Asgard’ archaea 5 , 6 . Despite the …

Are uncultivated bacteria really uncultivable?

ID Puspita, Y Kamagata, M Tanaka, K Asano… - Microbes and …, 2012 - jstage.jst.go.jp
Many strategies have been used to increase the number of bacterial cells that can be grown
from environmental samples but cultivation efficiency remains a challenge for microbial …

Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and …

…, A Ohashi, H Harada, Y Kamagata - … of systematic and …, 2006 - microbiologyresearch.org
One thermophilic (strain IMO-1 T ) and two mesophilic (strains KIBI-1 T and YMTK-2 T ) non-spore-forming,
non-motile, Gram-negative, multicellular filamentous micro-organisms, which …

[HTML][HTML] Analysis of 16S rRNA amplicon sequencing options on the Roche/454 next-generation titanium sequencing platform

…, C Hwang, S Wang, J Thimmapuram, Y Kamagata… - PloS one, 2011 - journals.plos.org
Background 16S rRNA gene pyrosequencing approach has revolutionized studies in microbial
ecology. While primer selection and short read length can affect the resulting microbial …

[HTML][HTML] Host-symbiont co-speciation and reductive genome evolution in gut symbiotic bacteria of acanthosomatid stinkbugs

…, T Hosokawa, N Nikoh, XY Meng, Y Kamagata… - BMC biology, 2009 - Springer
Background Host-symbiont co-speciation and reductive genome evolution have been
commonly observed among obligate endocellular insect symbionts, while such examples have …

A hidden pitfall in the preparation of agar media undermines microorganism cultivability

…, M Tanaka, CH Nakatsu, Y Kamagata - Applied and …, 2014 - Am Soc Microbiol
Microbiologists have been using agar growth medium for over 120 years. It revolutionized
microbiology in the 1890s when microbiologists were seeking effective methods to isolate …

Phylogenetic diversity of mesophilic and thermophilic granular sludges determined by 16S rRNA gene analysis

Y Sekiguchi, Y Kamagata, K Syutsubo… - …, 1998 - microbiologyresearch.org
The microbial diversity of two types of methanogenic granular sludge, mesophilic (35 C) and
thermophilic (55 C), which had been treating sucrose/propionate/acetate-based artificial …

Microlunatus phosphovorus gen. nov., sp. nov., a New Gram-Positive Polyphosphate-Accumulating Bacterium Isolated from Activated Sludge

…, K Masuda, Y Kamagata - … of Systematic and …, 1995 - microbiologyresearch.org
Polyphosphate-accumulating bacteria that were previously isolated from activated sludge
and exhibited high phosphate removal activity were studied taxonomically and …

Fluorescence in situ hybridization using 16S rRNA-targeted oligonucleotides reveals localization of methanogens and selected uncultured bacteria in mesophilic and …

Y Sekiguchi, Y Kamagata, K Nakamura… - Applied and …, 1999 - Am Soc Microbiol
16S rRNA-targeted in situ hybridization combined with confocal laser scanning microscopy
was used to elucidate the spatial distribution of microbes within two types of methanogenic …

Gemmatimonas aurantiaca gen. nov., sp. nov., a Gram-negative, aerobic, polyphosphate-accumulating micro-organism, the first cultured representative of the new bacterial …

…, P Hugenholtz, H Kim, Y Kamagata… - … of systematic and …, 2003 - microbiologyresearch.org
A phylogenetically novel aerobic bacterium was isolated from an anaerobic–aerobic sequential
batch reactor operated under enhanced biological phosphorus removal conditions for …