User profiles for Yojana Gadiya

Yojana Gadiya

Data Scientist at Fraunhofer ITMP
Verified email at itmp.fraunhofer.de
Cited by 269

COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology

…, S Baksi, B Schultz, Y Gadiya… - …, 2021 - academic.oup.com
The COVID-19 crisis has elicited a global response by the scientific community that has led
to a burst of publications on the pathophysiology of the virus. However, without coordinated …

[HTML][HTML] The FAIR Cookbook-the essential resource for and by FAIR doers

…, D Henderson, D Batista, I Emam, Y Gadiya… - Scientific data, 2023 - nature.com
The notion that data should be Findable, Accessible, Interoperable and Reusable, according
to the FAIR Principles, has become a global norm for good data stewardship and a …

[HTML][HTML] FAIR in action-a flexible framework to guide FAIRification

…, W Gu, J Strubel, RT Giessmann, I Emam, Y Gadiya… - Scientific data, 2023 - nature.com
The COVID-19 pandemic has highlighted the need for FAIR (Findable, Accessible, Interoperable,
and Reusable) data more than any other scientific challenge to date. We developed a …

[PDF][PDF] Modern drug discovery using ethnobotany: a large-scale cross-cultural analysis of traditional medicine reveals common therapeutic uses

D Domingo-Fernández, Y Gadiya, S Mubeen… - Iscience, 2023 - cell.com
For millennia, numerous cultures and civilizations have relied on traditional remedies
derived from plants to treat a wide range of conditions and ailments. Here, we systematically …

Comprehensive fragment screening of the SARS‐CoV‐2 proteome explores novel chemical space for drug development

…, K Azzaoui, MJJ Blommers, Y Gadiya… - Angewandte Chemie …, 2022 - Wiley Online Library
SARS‐CoV‐2 (SCoV2) and its variants of concern pose serious challenges to the public
health. The variants increased challenges to vaccines, thus necessitating for development of …

Pharmacophore-Based Machine Learning Model To Predict Ligand Selectivity for E3 Ligase Binders

R Karki, Y Gadiya, P Gribbon, A Zaliani - ACS omega, 2023 - ACS Publications
E3 ligases are enzymes that play a critical role in ubiquitin-mediated protein degradation and
are involved in various cellular processes. Pharmacophore analysis is a useful approach …

[HTML][HTML] Linking COVID-19 and heme-driven pathophysiologies: A combined computational–experimental approach

MT Hopp, D Domingo-Fernández, Y Gadiya, MS Detzel… - Biomolecules, 2021 - mdpi.com
The SARS-CoV-2 outbreak was declared a worldwide pandemic in 2020. Infection triggers
the respiratory tract disease COVID-19, which is accompanied by serious changes in clinical …

Ensembles of knowledge graph embedding models improve predictions for drug discovery

…, D Domingo-Fernández, Y Gadiya… - Briefings in …, 2022 - academic.oup.com
… Daniel Rivas-Barragan, Daniel Domingo-Fernández and Yojana Gadiya authors …
Yojana Gadiya is a researcher specialized in data science and data mining, particularly using …

[HTML][HTML] Selection of data sets for FAIRification in drug discovery and development: Which, why, and how?

E Alharbi, Y Gadiya, D Henderson, A Zaliani… - Drug discovery today, 2022 - Elsevier
Despite the intuitive value of adopting the Findable, Accessible, Interoperable, and Reusable
(FAIR) principles in both academic and industrial sectors, challenges exist in resourcing, …

PEMT: a patent enrichment tool for drug discovery

Y Gadiya, A Zaliani, P Gribbon… - …, 2023 - academic.oup.com
Motivation Drug discovery practitioners in industry and academia use semantic tools to
extract information from online scientific literature to generate new insights into targets, …