User profiles for Yu Toyoshima

Yu Toyoshima

Univ. of Tokyo
Verified email at bs.su-tokyo.ac.jp
Cited by 673

[PDF][PDF] Temporal coding of insulin action through multiplexing of the AKT pathway

H Kubota, R Noguchi, Y Toyoshima, Y Ozaki, S Uda… - Molecular cell, 2012 - cell.com
One of the unique characteristics of cellular signaling pathways is that a common signaling
pathway can selectively regulate multiple cellular functions of a hormone; however, this …

The selective control of glycolysis, gluconeogenesis and glycogenesis by temporal insulin patterns

R Noguchi, H Kubota, K Yugi, Y Toyoshima… - Molecular systems …, 2013 - embopress.org
Insulin governs systemic glucose metabolism, including glycolysis, gluconeogenesis and
glycogenesis, through temporal change and absolute concentration. However, how insulin‐…

Decoupling of receptor and downstream signals in the Akt pathway by its low-pass filter characteristics

KA Fujita, Y Toyoshima, S Uda, Y Ozaki, H Kubota… - Science …, 2010 - science.org
In cellular signal transduction, the information in an external stimulus is encoded in temporal
patterns in the activities of signaling molecules; for example, pulses of a stimulus may …

[PDF][PDF] Reconstruction of insulin signal flow from phosphoproteome and metabolome data

K Yugi, H Kubota, Y Toyoshima, R Noguchi, K Kawata… - Cell reports, 2014 - cell.com
Cellular homeostasis is regulated by signals through multiple molecular networks that
include protein phosphorylation and metabolites. However, where and when the signal flows …

[HTML][HTML] Accurate automatic detection of densely distributed cell nuclei in 3D space

Y Toyoshima, T Tokunaga, O Hirose… - PLoS computational …, 2016 - journals.plos.org
To measure the activity of neurons using whole-brain activity imaging, precise detection of
each neuron or its nucleus is required. In the head region of the nematode C. elegans, the …

[HTML][HTML] Neuron ID dataset facilitates neuronal annotation for whole-brain activity imaging of C. elegans

Y Toyoshima, S Wu, M Kanamori, H Sato, MS Jang… - BMC biology, 2020 - Springer
Background Annotation of cell identity is an essential process in neuroscience that allows
comparison of cells, including that of neural activities across different animals. In …

SPF-CellTracker: Tracking multiple cells with strongly-correlated moves using a spatial particle filter

…, T Tokunaga, Y Toyoshima… - … ACM transactions on …, 2017 - ieeexplore.ieee.org
Tracking many cells in time-lapse 3D image sequences is an important challenging task of
bioimage informatics. Motivated by a study of brain-wide 4D imaging of neural activity in C. …

Multiple sensory neurons mediate starvation-dependent aversive navigation in Caenorhabditis elegans

MS Jang, Y Toyoshima, M Tomioka… - Proceedings of the …, 2019 - National Acad Sciences
Animals demonstrate flexible behaviors through associative learning based on their
experiences. Deciphering the neural mechanisms for sensing and integrating multiple types of …

Neuronal sensorimotor integration guiding salt concentration navigation in Caenorhabditis elegans

A Matsumoto, Y Toyoshima, C Zhang… - Proceedings of the …, 2024 - National Acad Sciences
Animals navigate their environment by manipulating their movements and adjusting their
trajectory which requires a sophisticated integration of sensory data with their current motor …

Automated detection and tracking of many cells by using 4D live-cell imaging data

…, O Hirose, S Kawaguchi, Y Toyoshima… - …, 2014 - academic.oup.com
Motivation: Automated fluorescence microscopes produce massive amounts of images
observing cells, often in four dimensions of space and time. This study addresses two tasks of …