User profiles for Yuguang Xiong

Yuguang Xiong

Icahn School of Medicine at Mount Sinai
Verified email at mssm.edu
Cited by 424

A reference tissue atlas for the human kidney

…, JP Shapiro, A Pamreddy, S Winfree, Y Xiong… - Science …, 2022 - science.org
Kidney Precision Medicine Project (KPMP) is building a spatially specified human kidney
tissue atlas in health and disease with single-cell resolution. Here, we describe the …

[HTML][HTML] A comparison of mRNA sequencing with random primed and 3′-directed libraries

Y Xiong, M Soumillon, J Wu, J Hansen, B Hu… - Scientific reports, 2017 - nature.com
Creating a cDNA library for deep mRNA sequencing (mRNAseq) is generally done by
random priming, creating multiple sequencing fragments along each transcript. A 3′-end-focused …

[PDF][PDF] Mechanisms controlling cell size and shape during isotropic cell spreading

Y Xiong, P Rangamani, MA Fardin, A Lipshtat… - Biophysical journal, 2010 - cell.com
Cell motility is important for many developmental and physiological processes. Motility
arises from interactions between physical forces at the cell surface membrane and the …

[HTML][HTML] Transcriptomic profiling of human cardiac cells predicts protein kinase inhibitor-associated cardiotoxicity

…, J Hansen, A Stern, JV Shim, Y Xiong… - Nature …, 2020 - nature.com
Kinase inhibitors (KIs) represent an important class of anti-cancer drugs. Although
cardiotoxicity is a serious adverse event associated with several KIs, the reasons remain poorly …

Cadherin-11, Sparc-related modular calcium binding protein-2, and Pigment epithelium-derived factor are promising non-invasive biomarkers of kidney fibrosis

…, EU Azeloglu, J Hansen, C He, R Iyengar, Y Xiong… - Kidney international, 2021 - Elsevier
Kidney fibrosis constitutes the shared final pathway of nearly all chronic nephropathies, but
biomarkers for the non-invasive assessment of kidney fibrosis are currently not available. To …

[HTML][HTML] Predicting individual-specific cardiotoxicity responses induced by tyrosine kinase inhibitors

JV Shim, Y Xiong, P Dhanan, R Dariolli… - Frontiers in …, 2023 - frontiersin.org
Introduction: Tyrosine kinase inhibitor drugs (TKIs) are highly effective cancer drugs, yet many
TKIs are associated with various forms of cardiotoxicity. The mechanisms underlying these …

[PDF][PDF] Integrated single-cell sequencing and histopathological analyses reveal diverse injury and repair responses in a participant with acute kidney injury: a clinical …

…, EU Azeloglu, C He, R Iyengar, J Hansen, Y Xiong… - Kidney international, 2022 - Elsevier
Acute kidney injury (AKI) induces a broad range of clinically significant perturbations in
kidney morphology and function. Insights into the molecular and cellular basis governing a …

[PDF][PDF] Building containerized workflows using the BioDepot-workflow-builder

…, T Meiss, A Ingersoll, W Lloyd, D Kristiyanto, Y Xiong… - Cell systems, 2019 - cell.com
We present the BioDepot-workflow-builder (Bwb), a software tool that allows users to create
and execute reproducible bioinformatics workflows using a drag-and-drop interface. …

[PDF][PDF] Signaling network triggers and membrane physical properties control the actin cytoskeleton-driven isotropic phase of cell spreading

P Rangamani, MA Fardin, Y Xiong, A Lipshtat… - Biophysical journal, 2011 - cell.com
Cell spreading is regulated by signaling from the integrin receptors that activate intracellular
signaling pathways to control actin filament regulatory proteins. We developed a hybrid …

Precision Medicine in Nephrology: An Integrative Framework of Multidimensional Data in the Kidney Precision Medicine Project

…, G Nadkarni, M Patel, J Tokita, S Ward, Y Xiong… - American Journal of …, 2024 - Elsevier
Chronic kidney disease (CKD) and acute kidney injury (AKI) are heterogeneous syndromes
defined clinically by serial measures of kidney function. Each condition possesses strong …