User profiles for Zeguo Sun

Zeguo Sun

Bioinformatician, Icahn School of Medicine at Mount Sinai
Verified email at mssm.edu
Cited by 1146

[HTML][HTML] Comprehensive characterization of lncRNA-mRNA related ceRNA network across 12 major cancers

Y Zhang, Y Xu, LI Feng, F Li, Z Sun, T Wu, X Shi, J Li… - Oncotarget, 2016 - ncbi.nlm.nih.gov
Recent studies indicate that long noncoding RNAs (lncRNAs) can act as competing
endogenous RNAs (ceRNAs) to indirectly regulate mRNAs through shared microRNAs, which …

Single-cell RNA profiling of glomerular cells shows dynamic changes in experimental diabetic kidney disease

J Fu, KM Akat, Z Sun, W Zhang… - Journal of the …, 2019 - journals.lww.com
Background Recent single-cell RNA sequencing (scRNA-seq) analyses have offered much
insight into cell-specific gene expression profiles in normal kidneys. However, in diseased …

Subpathway-GM: identification of metabolic subpathways via joint power of interesting genes and metabolites and their topologies within pathways

…, C Zhang, D Shang, L Zhou, C Zou, Z Sun… - Nucleic acids …, 2013 - academic.oup.com
Various ‘omics’ technologies, including microarrays and gas chromatography mass spectrometry,
can be used to identify hundreds of interesting genes, proteins and metabolites, such …

The single-cell landscape of kidney immune cells reveals transcriptional heterogeneity in early diabetic kidney disease

J Fu, Z Sun, X Wang, T Zhang, W Yuan, F Salem… - Kidney international, 2022 - Elsevier
The pathogenesis of diabetic kidney disease (DKD) involves multifactorial processes that
converge to initiate and advance the disease. Although DKD is not typically classified as an …

Comparison of kidney transcriptomic profiles of early and advanced diabetic nephropathy reveals potential new mechanisms for disease progression

Y Fan, Z Yi, VD D'Agati, Z Sun, F Zhong, W Zhang… - Diabetes, 2019 - Am Diabetes Assoc
To identify the factors mediating the progression of diabetic nephropathy (DN), we performed
RNA sequencing of kidney biopsy samples from patients with early DN, advanced DN, and …

[HTML][HTML] Recipient APOL1 risk alleles associate with death-censored renal allograft survival and rejection episodes

Z Zhang, Z Sun, J Fu, Q Lin, K Banu… - The Journal of …, 2021 - Am Soc Clin Investig
Apolipoprotein L1 (APOL1) risk alleles in donor kidneys associate with graft loss, but whether
recipient risk allele expression affects transplant outcomes is unclear. To test whether …

A peripheral blood gene expression signature to diagnose subclinical acute rejection

…, H Shang, C Wei, P Cravedi, Z Sun… - Journal of the …, 2019 - journals.lww.com
Background In kidney transplant recipients, surveillance biopsies can reveal, despite stable
graft function, histologic features of acute rejection and borderline changes that are …

[HTML][HTML] LINE-1 promotes tumorigenicity and exacerbates tumor progression via stimulating metabolism reprogramming in non-small cell lung cancer

Z Sun, R Zhang, X Zhang, Y Sun, P Liu, N Francoeur… - Molecular cancer, 2022 - Springer
Background Long Interspersed Nuclear Element-1 (LINE-1, L1) is increasingly regarded as
a genetic risk for lung cancer. Transcriptionally active LINE-1 forms a L1-gene chimeric …

[HTML][HTML] HCK induces macrophage activation to promote renal inflammation and fibrosis via suppression of autophagy

M Chen, MC Menon, W Wang, J Fu, Z Yi, Z Sun… - Nature …, 2023 - nature.com
Renal inflammation and fibrosis are the common pathways leading to progressive chronic
kidney disease (CKD). We previously identified hematopoietic cell kinase (HCK) as …

[HTML][HTML] Deep learning identified pathological abnormalities predictive of graft loss in kidney transplant biopsies

…, C Xi, S Hultin, MRH Al Rasheed, L Li, F Su, Z Sun… - Kidney international, 2022 - Elsevier
Interstitial fibrosis, tubular atrophy, and inflammation are major contributors to kidney allograft
failure. Here we sought an objective, quantitative pathological assessment of these lesions …