User profiles for Zeguo Sun
Zeguo SunBioinformatician, Icahn School of Medicine at Mount Sinai Verified email at mssm.edu Cited by 1146 |
[HTML][HTML] Comprehensive characterization of lncRNA-mRNA related ceRNA network across 12 major cancers
Recent studies indicate that long noncoding RNAs (lncRNAs) can act as competing
endogenous RNAs (ceRNAs) to indirectly regulate mRNAs through shared microRNAs, which …
endogenous RNAs (ceRNAs) to indirectly regulate mRNAs through shared microRNAs, which …
Single-cell RNA profiling of glomerular cells shows dynamic changes in experimental diabetic kidney disease
J Fu, KM Akat, Z Sun, W Zhang… - Journal of the …, 2019 - journals.lww.com
Background Recent single-cell RNA sequencing (scRNA-seq) analyses have offered much
insight into cell-specific gene expression profiles in normal kidneys. However, in diseased …
insight into cell-specific gene expression profiles in normal kidneys. However, in diseased …
Subpathway-GM: identification of metabolic subpathways via joint power of interesting genes and metabolites and their topologies within pathways
…, C Zhang, D Shang, L Zhou, C Zou, Z Sun… - Nucleic acids …, 2013 - academic.oup.com
Various ‘omics’ technologies, including microarrays and gas chromatography mass spectrometry,
can be used to identify hundreds of interesting genes, proteins and metabolites, such …
can be used to identify hundreds of interesting genes, proteins and metabolites, such …
The single-cell landscape of kidney immune cells reveals transcriptional heterogeneity in early diabetic kidney disease
The pathogenesis of diabetic kidney disease (DKD) involves multifactorial processes that
converge to initiate and advance the disease. Although DKD is not typically classified as an …
converge to initiate and advance the disease. Although DKD is not typically classified as an …
Comparison of kidney transcriptomic profiles of early and advanced diabetic nephropathy reveals potential new mechanisms for disease progression
To identify the factors mediating the progression of diabetic nephropathy (DN), we performed
RNA sequencing of kidney biopsy samples from patients with early DN, advanced DN, and …
RNA sequencing of kidney biopsy samples from patients with early DN, advanced DN, and …
[HTML][HTML] Recipient APOL1 risk alleles associate with death-censored renal allograft survival and rejection episodes
Apolipoprotein L1 (APOL1) risk alleles in donor kidneys associate with graft loss, but whether
recipient risk allele expression affects transplant outcomes is unclear. To test whether …
recipient risk allele expression affects transplant outcomes is unclear. To test whether …
A peripheral blood gene expression signature to diagnose subclinical acute rejection
Background In kidney transplant recipients, surveillance biopsies can reveal, despite stable
graft function, histologic features of acute rejection and borderline changes that are …
graft function, histologic features of acute rejection and borderline changes that are …
[HTML][HTML] LINE-1 promotes tumorigenicity and exacerbates tumor progression via stimulating metabolism reprogramming in non-small cell lung cancer
Z Sun, R Zhang, X Zhang, Y Sun, P Liu, N Francoeur… - Molecular cancer, 2022 - Springer
Background Long Interspersed Nuclear Element-1 (LINE-1, L1) is increasingly regarded as
a genetic risk for lung cancer. Transcriptionally active LINE-1 forms a L1-gene chimeric …
a genetic risk for lung cancer. Transcriptionally active LINE-1 forms a L1-gene chimeric …
[HTML][HTML] HCK induces macrophage activation to promote renal inflammation and fibrosis via suppression of autophagy
Renal inflammation and fibrosis are the common pathways leading to progressive chronic
kidney disease (CKD). We previously identified hematopoietic cell kinase (HCK) as …
kidney disease (CKD). We previously identified hematopoietic cell kinase (HCK) as …
[HTML][HTML] Deep learning identified pathological abnormalities predictive of graft loss in kidney transplant biopsies
…, C Xi, S Hultin, MRH Al Rasheed, L Li, F Su, Z Sun… - Kidney international, 2022 - Elsevier
Interstitial fibrosis, tubular atrophy, and inflammation are major contributors to kidney allograft
failure. Here we sought an objective, quantitative pathological assessment of these lesions …
failure. Here we sought an objective, quantitative pathological assessment of these lesions …