Systematic evaluation of chromosome conformation capture assays

Betul Akgol Oksuz; Liyan Yang; Sameer Abraham; Sergey V. Venev; Nils Krietenstein; Krishna Mohan Parsi; Hakan Ozadam; Marlies E. Oomen; Ankita Nand; Hui Mao; Ryan MJ Genga; Rene Maehr; Oliver J. Rando; Leonid A. Mirny; Johan Harmen Gibcus; Job Dekker

doi:10.1101/2020.12.26.424448

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Systematic evaluation of chromosome conformation capture assays

Betul Akgol Oksuz, Liyan Yang, Sameer Abraham, Sergey V. Venev, Nils Krietenstein, Krishna Mohan Parsi, Hakan Ozadam, Marlies E. Oomen, Ankita Nand, Hui Mao, Ryan MJ Genga, Rene Maehr, Oliver J. Rando, Leonid A. Mirny, Johan Harmen Gibcus, View ORCID ProfileJob Dekker

doi: https://doi.org/10.1101/2020.12.26.424448

Betul Akgol Oksuz

1Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA

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Liyan Yang

1Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA

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Sameer Abraham

8Department of Physics, Massachusetts Institute of Technology, Cambridge, MA

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Sergey V. Venev

1Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA

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Nils Krietenstein

6Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA

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Krishna Mohan Parsi

5Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA

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Hakan Ozadam

7Program in Molecular Medicine, Diabetes Center of Excellence, University of Massachusetts Medical School, Worcester, MA. Department of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA

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Marlies E. Oomen

1Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA

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Ankita Nand

1Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA

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Hui Mao

5Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA

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Ryan MJ Genga

5Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA

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Rene Maehr

5Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA

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Oliver J. Rando

6Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA

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Leonid A. Mirny

3Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA

4Graduate Program in Biophysics, Harvard University, Cambridge, MA

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Johan Harmen Gibcus

1Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA

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For correspondence: Johan.Gibcus@umassmed.edu Job.Dekker@umassmed.edu

Job Dekker

1Program in Systems Biology, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, USA

2Howard Hughes Medical Institute, Chevy Chase, MD, USA

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ORCID record for Job Dekker
For correspondence: Johan.Gibcus@umassmed.edu Job.Dekker@umassmed.edu

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Posted December 27, 2020.

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Systematic evaluation of chromosome conformation capture assays

bioRxiv 2020.12.26.424448; doi: https://doi.org/10.1101/2020.12.26.424448

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Systematic evaluation of chromosome conformation capture assays

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