ShinyArchR.UiO: User-friendly, integrative and open-source tool for visualisation of single-cell ATAC-seq data using ArchR

Ankush Sharma; Akshay Akshay; Marie Rogne; Ragnhild Eskeland

doi:10.1101/2021.06.21.449316

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ShinyArchR.UiO: User-friendly, integrative and open-source tool for visualisation of single-cell ATAC-seq data using ArchR

View ORCID ProfileAnkush Sharma, Akshay Akshay, View ORCID ProfileMarie Rogne, View ORCID ProfileRagnhild Eskeland

doi: https://doi.org/10.1101/2021.06.21.449316

Ankush Sharma

1Department of Biosciences, University of Oslo, Norway

2Department of Informatics, University of Oslo, Norway

4Institute of Basic Medical Sciences, Department of Molecular Medicine, University of Oslo, Norway

5PharmaTox Strategic Research Initiative, Faculty of Mathematics and Natural Sciences, University of Oslo, Norway

6Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, Norway

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ORCID record for Ankush Sharma
For correspondence: [email protected] [email protected]

Akshay Akshay

3Urology Research Laboratory, Department for BioMedical Research DBMR, University of Bern, Bern, Switzerland

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Marie Rogne

4Institute of Basic Medical Sciences, Department of Molecular Medicine, University of Oslo, Norway

6Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, Norway

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Ragnhild Eskeland

4Institute of Basic Medical Sciences, Department of Molecular Medicine, University of Oslo, Norway

5PharmaTox Strategic Research Initiative, Faculty of Mathematics and Natural Sciences, University of Oslo, Norway

6Centre for Cancer Cell Reprogramming, Institute of Clinical Medicine, Faculty of Medicine, University of Oslo, Norway

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ORCID record for Ragnhild Eskeland
For correspondence: [email protected] [email protected]

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https://cancell.medisin.uio.no/ShinyArchR.UiO
https://Github.com/EskelandLab/ShinyArchRUiO

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Posted August 02, 2021.

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ShinyArchR.UiO: User-friendly, integrative and open-source tool for visualisation of single-cell ATAC-seq data using ArchR

Ankush Sharma, Akshay Akshay, Marie Rogne, Ragnhild Eskeland

bioRxiv 2021.06.21.449316; doi: https://doi.org/10.1101/2021.06.21.449316

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ShinyArchR.UiO: User-friendly, integrative and open-source tool for visualisation of single-cell ATAC-seq data using ArchR

Ankush Sharma, Akshay Akshay, Marie Rogne, Ragnhild Eskeland

bioRxiv 2021.06.21.449316; doi: https://doi.org/10.1101/2021.06.21.449316

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