hudson: A User-Friendly R Package to Extend Manhattan Plots

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Anastasia Lucas, Anurag Verma, Marylyn D. Ritchie

doi: https://doi.org/10.1101/2022.01.25.474274

Anastasia Lucas

1Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States

Anurag Verma

1Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States

2Institute for Biomedical Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States

3Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States

Marylyn D. Ritchie

1Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States

3Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States

https://github.com/RitchieLab/hudson/tree/master/data
http://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/GCST006001-GCST007000/GCST006259/
http://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/GCST006001-GCST007000/GCST006258/
http://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/GCST004001-GCST005000/GCST004232/
http://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/GCST004001-GCST005000/GCST004233/
http://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/GCST004001-GCST005000/GCST004235/
http://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/GCST004001-GCST005000/GCST004237/
https://github.com/RitchieLab/utility/tree/master/personal/ana/hudson-paper