GenomicSuperSignature: interpretation of RNA-seq experiments through robust, efficient comparison to public databases

Sehyun Oh; Ludwig Geistlinger; Marcel Ramos; Daniel Blankenberg; Marius van den Beek; Jaclyn N. Taroni; Vincent Carey; Casey Greene; Levi Waldron; Sean Davis

doi:10.1101/2021.05.26.445900

New Results

GenomicSuperSignature: interpretation of RNA-seq experiments through robust, efficient comparison to public databases

Sehyun Oh, Ludwig Geistlinger, Marcel Ramos, Daniel Blankenberg, View ORCID ProfileMarius van den Beek, Jaclyn N. Taroni, View ORCID ProfileVincent Carey, View ORCID ProfileCasey Greene, Levi Waldron, View ORCID ProfileSean Davis

doi: https://doi.org/10.1101/2021.05.26.445900

Sehyun Oh

1City University of New York, New York, NY, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Ludwig Geistlinger

2Center for Computational Biomedicine, Harvard Medical School, Boston, MA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Marcel Ramos

1City University of New York, New York, NY, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Daniel Blankenberg

3Genomic Medicine Institute, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio, USA

4Cleveland Clinic Lerner College of Medicine, Case Western Reserve University, Cleveland, Ohio, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Marius van den Beek

5The Pennsylvania State University, State College, PA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Marius van den Beek

Jaclyn N. Taroni

6Childhood Cancer Data Lab, Alex’s Lemonade Stand Foundation, Philadelphia, PA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Vincent Carey

7Harvard Medical School, Boston, MA, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Vincent Carey

Casey Greene

8University of Colorado Anschutz School of Medicine, Denver, CO, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Casey Greene

Levi Waldron

1City University of New York, New York, NY, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Sean Davis

8University of Colorado Anschutz School of Medicine, Denver, CO, USA

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Sean Davis
For correspondence: seandavi{at}gmail.com

Abstract
Full Text
Info/History
Metrics
Data/Code
Preview PDF

http://www.bioconductor.org/packages/GenomicSuperSignature
https://github.com/shbrief/GenomicSuperSignature

View the discussion thread.

PreviousNext

Posted February 14, 2022.

Download PDF

Data/Code

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following GenomicSuperSignature: interpretation of RNA-seq experiments through robust, efficient comparison to public databases

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

GenomicSuperSignature: interpretation of RNA-seq experiments through robust, efficient comparison to public databases

Sehyun Oh, Ludwig Geistlinger, Marcel Ramos, Daniel Blankenberg, Marius van den Beek, Jaclyn N. Taroni, Vincent Carey, Casey Greene, Levi Waldron, Sean Davis

bioRxiv 2021.05.26.445900; doi: https://doi.org/10.1101/2021.05.26.445900

Share This Article:

Citation Tools

GenomicSuperSignature: interpretation of RNA-seq experiments through robust, efficient comparison to public databases

Sehyun Oh, Ludwig Geistlinger, Marcel Ramos, Daniel Blankenberg, Marius van den Beek, Jaclyn N. Taroni, Vincent Carey, Casey Greene, Levi Waldron, Sean Davis

bioRxiv 2021.05.26.445900; doi: https://doi.org/10.1101/2021.05.26.445900

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Bioinformatics

Subject Areas

All Articles

Animal Behavior and Cognition (5916)
Biochemistry (13386)
Bioengineering (10199)
Bioinformatics (32596)
Biophysics (16786)
Cancer Biology (13866)
Cell Biology (19694)
Clinical Trials (138)
Developmental Biology (10642)
Ecology (15747)
Epidemiology (2067)
Evolutionary Biology (20057)
Genetics (13246)
Genomics (18384)
Immunology (13483)
Microbiology (31572)
Molecular Biology (13165)
Neuroscience (68772)
Paleontology (510)
Pathology (2133)
Pharmacology and Toxicology (3683)
Physiology (5742)
Plant Biology (11795)
Scientific Communication and Education (1789)
Synthetic Biology (3311)
Systems Biology (8044)
Zoology (1819)