Accurate estimation of intrinsic biases for improved analysis of bulk and single-cell chromatin accessibility sequencing data using SELMA

Shengen Shawn Hu; Lin Liu; Qi Li; Wenjing Ma; Michael J. Guertin; Clifford A. Meyer; Ke Deng; Tingting Zhang; Chongzhi Zang

doi:10.1101/2021.10.22.465530

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Accurate estimation of intrinsic biases for improved analysis of bulk and single-cell chromatin accessibility sequencing data using SELMA

Shengen Shawn Hu, View ORCID ProfileLin Liu, Qi Li, View ORCID ProfileWenjing Ma, Michael J. Guertin, Clifford A. Meyer, Ke Deng, Tingting Zhang, View ORCID ProfileChongzhi Zang

doi: https://doi.org/10.1101/2021.10.22.465530

Shengen Shawn Hu

1Center for Public Health Genomics, University of Virginia, Charlottesville, VA 22908, USA

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Lin Liu

2Institute of Natural Sciences, MOE-LSC, School of Mathematical Sciences, and SJTU-Yale Joint Center for Biostatistics and Data Science, Shanghai Jiao Tong University, Shanghai 200240, China

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ORCID record for Lin Liu

Qi Li

3Center for Statistical Science, Tsinghua University, Beijing 100084, China

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Wenjing Ma

1Center for Public Health Genomics, University of Virginia, Charlottesville, VA 22908, USA

4Department of Computer Science, Emory University, Atlanta, GA 30322, USA

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Michael J. Guertin

5Center for Cell Analysis and Modeling, Department of Genetics and Genome Sciences, University of Connecticut, Farmington, CT 06030, USA

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Clifford A. Meyer

6Department of Data Science, Dana-Farber Cancer Institute, Boston, MA 02215, USA

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Ke Deng

3Center for Statistical Science, Tsinghua University, Beijing 100084, China

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Tingting Zhang

7Department of Statistics, University of Pittsburgh, Pittsburgh, PA 15260, USA

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Chongzhi Zang

1Center for Public Health Genomics, University of Virginia, Charlottesville, VA 22908, USA

8Department of Public Health Sciences, University of Virginia, Charlottesville, VA 22908, USA

9UVA Cancer Center, University of Virginia, Charlottesville, VA 22908, USA

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ORCID record for Chongzhi Zang
For correspondence: zang@virginia.edu

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Posted May 30, 2022.

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Accurate estimation of intrinsic biases for improved analysis of bulk and single-cell chromatin accessibility sequencing data using SELMA

Shengen Shawn Hu, Lin Liu, Qi Li, Wenjing Ma, Michael J. Guertin, Clifford A. Meyer, Ke Deng, Tingting Zhang, Chongzhi Zang

bioRxiv 2021.10.22.465530; doi: https://doi.org/10.1101/2021.10.22.465530

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Accurate estimation of intrinsic biases for improved analysis of bulk and single-cell chromatin accessibility sequencing data using SELMA

Shengen Shawn Hu, Lin Liu, Qi Li, Wenjing Ma, Michael J. Guertin, Clifford A. Meyer, Ke Deng, Tingting Zhang, Chongzhi Zang

bioRxiv 2021.10.22.465530; doi: https://doi.org/10.1101/2021.10.22.465530

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