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The Beaker Phenomenon and the Genomic Transformation of Northwest Europe

Iñigo Olalde, Selina Brace, Morten E. Allentoft, Ian Armit, Kristian Kristiansen, Nadin Rohland, Swapan Mallick, Thomas Booth, Anna Szécsényi-Nagy, Alissa Mittnik, Eveline Altena, Mark Lipson, Iosif Lazaridis, Nick Patterson, Nasreen Broomandkhoshbacht, Yoan Diekmann, Zuzana Faltyskova, Daniel Fernandes, Matthew Ferry, Eadaoin Harney, Peter de Knijff, Megan Michel, Jonas Oppenheimer, Kristin Stewardson, Alistair Barclay, Kurt W. Alt, Azucena Avilés Fernández, Eszter Bánffy, Maria Bernabò-Brea, David Billoin, Concepción Blasco, Clive Bonsall, Laura Bonsall, Tim Allen, Lindsey Büster, Sophie Carver, Laura Castells Navarro, Oliver Edward Craig, Gordon T. Cook, Barry Cunliffe, Anthony Denaire, Kirsten Egging Dinwiddy, Natasha Dodwell, Michal Ernée, Christopher Evans, Milan Kuchařík, Joan Francès Farré, Harry Fokkens, Chris Fowler, Michiel Gazenbeek, Rafael Garrido Pena, María Haber-Uriarte, Elżbieta Haduch, Gill Hey, Nick Jowett, Timothy Knowles, Ken Massy, Saskia Pfrengle, Philippe Lefranc, Olivier Lemercier, Arnaud Lefebvre, Joaquín Lomba Maurandi, Tona Majó, Jacqueline I. McKinley, Kathleen McSweeney, Mende Balázs Gusztáv, Alessandra Modi, Gabriella Kulcsár, Viktória Kiss, András Czene, Róbert Patay, Anna Endrődi, Kitti Köhler, Tamás Hajdu, João Luís Cardoso, Corina Liesau, Michael Parker Pearson, Piotr Włodarczak, T. Douglas Price, Pilar Prieto, Pierre-Jérôme Rey, Patricia Ríos, Roberto Risch, Manuel A. Rojo Guerra, Aurore Schmitt, Joël Serralongue, Ana Maria Silva, Václav Smrčka, Luc Vergnaud, João Zilhão, David Caramelli, Thomas Higham, Volker Heyd, Alison Sheridan, Karl-Göran Sjögren, Mark G. Thomas, Philipp W. Stockhammer, Ron Pinhasi, Johannes Krause, Wolfgang Haak, Ian Barnes, Carles Lalueza-Fox, David Reich
doi: https://doi.org/10.1101/135962
Iñigo Olalde
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
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Selina Brace
2Department of Earth Sciences, Natural History Museum, London SW7 5BD, UK
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Morten E. Allentoft
3Centre for GeoGenetics, Natural History Museum, University of Copenhagen, Copenhagen 1350, Denmark
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Ian Armit
4School of Archaeological Sciences, University of Bradford, Bradford BD7 1DP, UK
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Kristian Kristiansen
5University of Gothenburg, Gothenburg 405 30, Sweden
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Nadin Rohland
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
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Swapan Mallick
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
6Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA
7Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
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Thomas Booth
2Department of Earth Sciences, Natural History Museum, London SW7 5BD, UK
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Anna Szécsényi-Nagy
8Laboratory of Archaeogenetics, Institute of Archaeology, Research Centre for the Humanities, Hungarian Academy of Sciences, Budapest 1097, Hungary
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Alissa Mittnik
9Institute for Archaeological Sciences, Archaeo- and Palaeogenetics, University of Tübingen, Tübingen 72070, Germany
10Department of Archaeogenetics, Max Planck Institute for the Science of Human History, 07745 Jena, Germany
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Eveline Altena
11Department of Human Genetics, Leiden University Medical Center, Leiden 2333, The Netherlands
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Mark Lipson
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
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Iosif Lazaridis
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
6Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA
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Nick Patterson
6Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA
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Nasreen Broomandkhoshbacht
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
7Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
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Yoan Diekmann
12Research Department of Genetics, Evolution and Environment, University College London, London WC1E 6BT, UK
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Zuzana Faltyskova
12Research Department of Genetics, Evolution and Environment, University College London, London WC1E 6BT, UK
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Daniel Fernandes
13School of Archaeology and Earth Institute, University College Dublin, Dublin 4, Ireland
14Research Center for Anthropology and Health, Department of Life Science, University of Coimbra, Coimbra 3000-456, Portugal
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Matthew Ferry
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
7Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
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Eadaoin Harney
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
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Peter de Knijff
11Department of Human Genetics, Leiden University Medical Center, Leiden 2333, The Netherlands
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Megan Michel
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
7Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
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Jonas Oppenheimer
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
7Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
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Kristin Stewardson
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
7Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
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Alistair Barclay
15Wessex Archaeology, Salisbury SP4 6EB, UK
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Kurt W. Alt
16Center of Natural and Cultural History of Man, Danube Private University, Krems 3500, Austria
17Department of Biomedical Engineering, Basel University, Basel 4123, Switzerland
18Integrative Prehistory and Archaeological Science, Basel University, Switzerland
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Azucena Avilés Fernández
19área de Prehistoria, Universidad de Murcia, Murcia 30001, Spain
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Eszter Bánffy
20Institute of Archaeology, Research Centre for the Humanities, Hungarian Academy of Sciences, Budapest 1097, Hungary
21Romano-Germanic Commission, German Archaeological Institute, Frankfurt/Main 60325, Germany
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Maria Bernabò-Brea
22Museo Archeologico Nazionale di Parma, Parma 43100, Italy
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David Billoin
23INRAP, Institut National de Recherches Archéologiques Préventives, Buffard 25440, France
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Concepción Blasco
24Departamento de Prehistoria y Arqueología, Universidad Autónoma de Madrid, Madrid 28049, Spain
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Clive Bonsall
25School of History, Classics and Archaeology, University of Edinburgh, Edinburgh EH8 9AG, UK
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Laura Bonsall
26Independent Researcher, 10 Merchiston Gardens, Edinburgh EH10 5DD, UK
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Tim Allen
27Oxford Archaeology, Oxford, OX2 0ES, UK
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Lindsey Büster
4School of Archaeological Sciences, University of Bradford, Bradford BD7 1DP, UK
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Sophie Carver
28Department of Archaeology and Anthropology, University of Bristol, Bristol BS8 1UU, UK
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Laura Castells Navarro
4School of Archaeological Sciences, University of Bradford, Bradford BD7 1DP, UK
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Oliver Edward Craig
29BioArCh, Department of Archaeology, University of York, York, YO10 5DD, UK
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Gordon T. Cook
30Scottish Universities Environmental Research Centre East Kilbride G75 0QF, UK
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Barry Cunliffe
31Institute of Archaeology, University of Oxford, Oxford OX1 2PG, UK
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Anthony Denaire
32Université de Strasbourg, Strasbourg 67081, France
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Kirsten Egging Dinwiddy
15Wessex Archaeology, Salisbury SP4 6EB, UK
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Natasha Dodwell
33Oxford Archaeology East, Cambridge CB23 8SQ, UK
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Michal Ernée
34Institute of Archaeology, Czech Academy of Sciences, Prague 118 01, Czech Republic
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Christopher Evans
35Cambridge Archaeological Unit, Department of Archaeology, University of Cambridge, Cambridge CB3 0DT, UK
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Milan Kuchařík
36Labrys o.p.s. Prague 198 00, Czech Republic
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Joan Francès Farré
37Museu i Poblat Ibèric de Ca n’Oliver, Cerdanyola del Vallès 08290, Spain
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Harry Fokkens
38Faculty of Archaeology, Leiden University, 2333 CC Leiden, The Netherlands
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Chris Fowler
39School of History, Classics & Archaeology, Newcastle University, Newcastle Upon Tyne NE1 7RU, UK
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Michiel Gazenbeek
40INRAP, Institut National de Recherches Archéologiques Préventives, Nice 06300, France
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Rafael Garrido Pena
24Departamento de Prehistoria y Arqueología, Universidad Autónoma de Madrid, Madrid 28049, Spain
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María Haber-Uriarte
19área de Prehistoria, Universidad de Murcia, Murcia 30001, Spain
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Elżbieta Haduch
41Institute of Zoology and Biomedical Research, Jagiellonian University, Cracow 31-007, Poland
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Gill Hey
27Oxford Archaeology, Oxford, OX2 0ES, UK
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Nick Jowett
42Great Orme Mines, Great Orme, Llandudno LL30 2XG, UK
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Timothy Knowles
43Bristol Radiocarbon Accelerator Mass Spectrometry Facility, University of Bristol, Bristol BS8 1UU, UK
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Ken Massy
44Institut für Vor- und Frühgeschichtliche Archäologie und Provinzialrömische Archäologie, Ludwig-Maximilians-Universität München, Munich 80539, Germany
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Saskia Pfrengle
45Institute for Archaeological Sciences, Eberhard-Karls-University of Tübingen, Tübingen 72070, Germany
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Philippe Lefranc
46INRAP, Institut National de Recherches Archéologiques Préventives, Strasbourg 67100, France
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Olivier Lemercier
47Université Paul-Valéry - Montpellier 3, UMR 5140 ASM, Montpellier 34199, France
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Arnaud Lefebvre
48INRAP, Institut National de Recherches Archéologiques Préventives, Metz 57063, France
49UMR 5199, Pacea, équipe A3P, Université de Bordeaux, Talence 33400, France
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Joaquín Lomba Maurandi
19área de Prehistoria, Universidad de Murcia, Murcia 30001, Spain
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Tona Majó
50Archaeom. Departament de Prehistòria, Universitat Autònoma de Barcelona, Cerdanyola del Vallès 08193, Spain
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Jacqueline I. McKinley
15Wessex Archaeology, Salisbury SP4 6EB, UK
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Kathleen McSweeney
25School of History, Classics and Archaeology, University of Edinburgh, Edinburgh EH8 9AG, UK
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Mende Balázs Gusztáv
8Laboratory of Archaeogenetics, Institute of Archaeology, Research Centre for the Humanities, Hungarian Academy of Sciences, Budapest 1097, Hungary
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Alessandra Modi
51Department of Biology, University of Florence, Florence 50121, Italy
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Gabriella Kulcsár
20Institute of Archaeology, Research Centre for the Humanities, Hungarian Academy of Sciences, Budapest 1097, Hungary
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Viktória Kiss
20Institute of Archaeology, Research Centre for the Humanities, Hungarian Academy of Sciences, Budapest 1097, Hungary
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András Czene
52Salisbury Ltd., Budaörs 2040, Hungary
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Róbert Patay
53Ferenczy Museum Center, Szentendre 2100, Hungary
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Anna Endrődi
54Budapest History Museum, Budapest 1014, Hungary
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Kitti Köhler
20Institute of Archaeology, Research Centre for the Humanities, Hungarian Academy of Sciences, Budapest 1097, Hungary
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Tamás Hajdu
55Department of Biological Anthropology, Eötvös Loránd University, Budapest 1117, Hungary
56Hungarian Natural History Museum, Budapest 1083, Hungary
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João Luís Cardoso
57Centro de Arqueologia, Universidade de Lisboa, Lisboa 1600-214, Portugal
58Universidade Aberta, Lisboa 1269-001, Portugal
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Corina Liesau
24Departamento de Prehistoria y Arqueología, Universidad Autónoma de Madrid, Madrid 28049, Spain
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Michael Parker Pearson
59Institute of Archaeology, University College London, London WC1H 0PY, UK
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Piotr Włodarczak
60Institute of Archaeology and Ethnology, Polish Academy of Sciences, Kraków 31-016, Poland
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T. Douglas Price
61Laboratory for Archaeological Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
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Pilar Prieto
62University of Santiago de Compostela, Santiago de Compostela 15782, Spain
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Pierre-Jérôme Rey
63UMR 5204 Laboratoire Edytem, Université Savoie Mont Blanc, Chambéry 73376, France
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Patricia Ríos
24Departamento de Prehistoria y Arqueología, Universidad Autónoma de Madrid, Madrid 28049, Spain
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Roberto Risch
64Departament de Prehistòria, Universitat Autònoma de Barcelona, Cerdanyola del Vallès 08193, Spain
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Manuel A. Rojo Guerra
65Department of Prehistory and Archaeology, Faculty of Philosophy and Letters, Valladolid University, Valladolid 47011, Spain
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Aurore Schmitt
66UMR 7268 ADES, CNRS, Aix-Marseille Univ, EFS, Faculté de médecine Nord, Marseille 13015, France
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Joël Serralongue
67Service archéologique, Conseil Général de la Haute-Savoie, Chambéry 73000, France
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Ana Maria Silva
14Research Center for Anthropology and Health, Department of Life Science, University of Coimbra, Coimbra 3000-456, Portugal
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Václav Smrčka
68Institute for History of Medicine and Foreign Languages, First Faculty of Medicine, Charles University, Prague 121 08, Czech Republic
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Luc Vergnaud
69ANTEA Bureau d’étude en Archéologie, Habsheim 68440, France
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João Zilhão
57Centro de Arqueologia, Universidade de Lisboa, Lisboa 1600-214, Portugal
70Institució Catalana de Recerca i Estudis Avançats, Barcelona 08010, Spain
71Departament d'Història i Arqueologia, Universitat de Barcelona, Barcelona 08001, Spain
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David Caramelli
51Department of Biology, University of Florence, Florence 50121, Italy
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Thomas Higham
72Oxford Radiocarbon Accelerator Unit, RLAHA, University of Oxford, Oxford OX1 3QY, UK
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Volker Heyd
28Department of Archaeology and Anthropology, University of Bristol, Bristol BS8 1UU, UK
73Department of Philosophy, History, Culture and Art Studies, Section of Archaeology, University of Helsinki, Helsinki 00014, Finland
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Alison Sheridan
74National Museums Scotland, Edinburgh EH1 1JF, UK
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Karl-Göran Sjögren
5University of Gothenburg, Gothenburg 405 30, Sweden
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Mark G. Thomas
12Research Department of Genetics, Evolution and Environment, University College London, London WC1E 6BT, UK
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Philipp W. Stockhammer
44Institut für Vor- und Frühgeschichtliche Archäologie und Provinzialrömische Archäologie, Ludwig-Maximilians-Universität München, Munich 80539, Germany
75Max Planck Institute for the Science of Human History, Jena 07745, Germany
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Ron Pinhasi
13School of Archaeology and Earth Institute, University College Dublin, Dublin 4, Ireland
76Department of Anthropology, University of Vienna, Vienna 1090, Austria
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Johannes Krause
75Max Planck Institute for the Science of Human History, Jena 07745, Germany
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Wolfgang Haak
75Max Planck Institute for the Science of Human History, Jena 07745, Germany
77Australian Centre for Ancient DNA, School of Biological Sciences, University of Adelaide, Adelaide 5005, Australia
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Ian Barnes
2Department of Earth Sciences, Natural History Museum, London SW7 5BD, UK
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Carles Lalueza-Fox
78Institute of Evolutionary Biology, CSIC-Universitat Pompeu Fabra, Barcelona 08003, Spain
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David Reich
1Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
6Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA
7Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
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Abstract

Bell Beaker pottery spread across western and central Europe beginning around 2750 BCE before disappearing between 2200–1800 BCE. The mechanism of its expansion is a topic of long-standing debate, with support for both cultural diffusion and human migration. We present new genome-wide ancient DNA data from 170 Neolithic, Copper Age and Bronze Age Europeans, including 100 Beaker-associated individuals. In contrast to the Corded Ware Complex, which has previously been identified as arriving in central Europe following migration from the east, we observe limited genetic affinity between Iberian and central European Beaker Complex-associated individuals, and thus exclude migration as a significant mechanism of spread between these two regions. However, human migration did have an important role in the further dissemination of the Beaker Complex, which we document most clearly in Britain using data from 80 newly reported individuals dating to 3900–1200 BCE. British Neolithic farmers were genetically similar to contemporary populations in continental Europe and in particular to Neolithic Iberians, suggesting that a portion of the farmer ancestry in Britain came from the Mediterranean rather than the Danubian route of farming expansion. Beginning with the Beaker period, and continuing through the Bronze Age, all British individuals harboured high proportions of Steppe ancestry and were genetically closely related to Beaker-associated individuals from the Lower Rhine area. We use these observations to show that the spread of the Beaker Complex to Britain was mediated by migration from the continent that replaced >90% of Britain’s Neolithic gene pool within a few hundred years, continuing the process that brought Steppe ancestry into central and northern Europe 400 years earlier.

Footnotes

  • ↵* Principal investigators who contributed centrally to this study

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The Beaker Phenomenon and the Genomic Transformation of Northwest Europe
Iñigo Olalde, Selina Brace, Morten E. Allentoft, Ian Armit, Kristian Kristiansen, Nadin Rohland, Swapan Mallick, Thomas Booth, Anna Szécsényi-Nagy, Alissa Mittnik, Eveline Altena, Mark Lipson, Iosif Lazaridis, Nick Patterson, Nasreen Broomandkhoshbacht, Yoan Diekmann, Zuzana Faltyskova, Daniel Fernandes, Matthew Ferry, Eadaoin Harney, Peter de Knijff, Megan Michel, Jonas Oppenheimer, Kristin Stewardson, Alistair Barclay, Kurt W. Alt, Azucena Avilés Fernández, Eszter Bánffy, Maria Bernabò-Brea, David Billoin, Concepción Blasco, Clive Bonsall, Laura Bonsall, Tim Allen, Lindsey Büster, Sophie Carver, Laura Castells Navarro, Oliver Edward Craig, Gordon T. Cook, Barry Cunliffe, Anthony Denaire, Kirsten Egging Dinwiddy, Natasha Dodwell, Michal Ernée, Christopher Evans, Milan Kuchařík, Joan Francès Farré, Harry Fokkens, Chris Fowler, Michiel Gazenbeek, Rafael Garrido Pena, María Haber-Uriarte, Elżbieta Haduch, Gill Hey, Nick Jowett, Timothy Knowles, Ken Massy, Saskia Pfrengle, Philippe Lefranc, Olivier Lemercier, Arnaud Lefebvre, Joaquín Lomba Maurandi, Tona Majó, Jacqueline I. McKinley, Kathleen McSweeney, Mende Balázs Gusztáv, Alessandra Modi, Gabriella Kulcsár, Viktória Kiss, András Czene, Róbert Patay, Anna Endrődi, Kitti Köhler, Tamás Hajdu, João Luís Cardoso, Corina Liesau, Michael Parker Pearson, Piotr Włodarczak, T. Douglas Price, Pilar Prieto, Pierre-Jérôme Rey, Patricia Ríos, Roberto Risch, Manuel A. Rojo Guerra, Aurore Schmitt, Joël Serralongue, Ana Maria Silva, Václav Smrčka, Luc Vergnaud, João Zilhão, David Caramelli, Thomas Higham, Volker Heyd, Alison Sheridan, Karl-Göran Sjögren, Mark G. Thomas, Philipp W. Stockhammer, Ron Pinhasi, Johannes Krause, Wolfgang Haak, Ian Barnes, Carles Lalueza-Fox, David Reich
bioRxiv 135962; doi: https://doi.org/10.1101/135962
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The Beaker Phenomenon and the Genomic Transformation of Northwest Europe
Iñigo Olalde, Selina Brace, Morten E. Allentoft, Ian Armit, Kristian Kristiansen, Nadin Rohland, Swapan Mallick, Thomas Booth, Anna Szécsényi-Nagy, Alissa Mittnik, Eveline Altena, Mark Lipson, Iosif Lazaridis, Nick Patterson, Nasreen Broomandkhoshbacht, Yoan Diekmann, Zuzana Faltyskova, Daniel Fernandes, Matthew Ferry, Eadaoin Harney, Peter de Knijff, Megan Michel, Jonas Oppenheimer, Kristin Stewardson, Alistair Barclay, Kurt W. Alt, Azucena Avilés Fernández, Eszter Bánffy, Maria Bernabò-Brea, David Billoin, Concepción Blasco, Clive Bonsall, Laura Bonsall, Tim Allen, Lindsey Büster, Sophie Carver, Laura Castells Navarro, Oliver Edward Craig, Gordon T. Cook, Barry Cunliffe, Anthony Denaire, Kirsten Egging Dinwiddy, Natasha Dodwell, Michal Ernée, Christopher Evans, Milan Kuchařík, Joan Francès Farré, Harry Fokkens, Chris Fowler, Michiel Gazenbeek, Rafael Garrido Pena, María Haber-Uriarte, Elżbieta Haduch, Gill Hey, Nick Jowett, Timothy Knowles, Ken Massy, Saskia Pfrengle, Philippe Lefranc, Olivier Lemercier, Arnaud Lefebvre, Joaquín Lomba Maurandi, Tona Majó, Jacqueline I. McKinley, Kathleen McSweeney, Mende Balázs Gusztáv, Alessandra Modi, Gabriella Kulcsár, Viktória Kiss, András Czene, Róbert Patay, Anna Endrődi, Kitti Köhler, Tamás Hajdu, João Luís Cardoso, Corina Liesau, Michael Parker Pearson, Piotr Włodarczak, T. Douglas Price, Pilar Prieto, Pierre-Jérôme Rey, Patricia Ríos, Roberto Risch, Manuel A. Rojo Guerra, Aurore Schmitt, Joël Serralongue, Ana Maria Silva, Václav Smrčka, Luc Vergnaud, João Zilhão, David Caramelli, Thomas Higham, Volker Heyd, Alison Sheridan, Karl-Göran Sjögren, Mark G. Thomas, Philipp W. Stockhammer, Ron Pinhasi, Johannes Krause, Wolfgang Haak, Ian Barnes, Carles Lalueza-Fox, David Reich
bioRxiv 135962; doi: https://doi.org/10.1101/135962

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