Describing the genetic diversity in the gene pool of crops will provide breeders with novel
resources for varietal improvement. Nested Association Mapping (NAM) populations are …

The combination of advanced genomics, genome editing and plant transformation biology
presents a powerful platform for basic plant research and crop improvement. Together these …

Motivation Genotyping by sequencing (GBS) generates datasets that are challenging to handle
by current genetic mapping software with graphical interface. Geneticists need new user-…

Low-coverage next-generation sequencing methodologies are routinely employed to genotype
large populations. Missing data in these populations manifest both as missing markers …

Background Many areas critical to agricultural production and research, such as the breeding
and trait mapping in plants and livestock, require robust and scalable genotyping platforms…

Since their initial discovery, transposons have been widely used as mutagens for forward
and reverse genetic screens in a range of organisms. The problems of high copy number and …

Genome wide association studies (GWAS) can play an essential role in understanding
genetic basis of complex traits in plants and animals. Conventional SNP-based linear mixed …

Motivation Low-coverage next-generation sequencing (LC-NGS) methods can be used to
genotype bi-parental populations. This approach allows the creation of highly saturated …

Motivation Bi-parental populations genotyping can be performed with low-coverage next-generation
sequencing (LC-NGS). This allows the creation of highly saturated genetic maps at …

Genome wide association studies (GWAS) can play an essential role in understanding
genetic basis of complex traits in plants and animals. Conventional SNP-based linear mixed …